Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07]
257 sequences; 35,046,070 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq86 138 1e-27
seq142 113 4e-20
seq87 113 4e-20
seq23 105 6e-18
>seq86
Length=94082
Score = 138 bits (152), Expect = 1e-27
Identities = 142/183 (78%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| |||||| |||||||| | || ||||||||||| |||||||| |
Sbjct 12372 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 12431
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792
|||||||||| ||||| | ||||| || |||||| ||| ||| || ||| ||| |
Sbjct 12432 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTT-GACGTTG 12490
Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851
| | |||||||||||||| || || | || || || ||||||||||| ||||| |||
Sbjct 12491 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 12550
Query 41852 AAA 41854
|||
Sbjct 12551 AAA 12553
>seq142
Length=51707
Score = 113 bits (124), Expect = 4e-20
Identities = 149/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| || || || | ||||| || || ||| |||||| || |||||||| || ||
Sbjct 45989 CCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAA 46048
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || ||||||||||| ||||| || || ||||| ||||| | |||
Sbjct 46049 AGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 46108
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||||| ||| || ||| ||| | | | ||| ||||| ||||| ||
Sbjct 46109 ATACCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATAGTATCGCTGGACTCAAC 46167
Query 41815 CTCCACCGTTATCGTTTTACCCGT 41838
||| | || || ||||| || ||
Sbjct 46168 CTCAAGGGTGATGGTTTTGCCAGT 46191
Score = 109 bits (120), Expect = 5e-19
Identities = 110/143 (77%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || |||||||| | || || || || ||| |||||||||||| |||||||| |||
Sbjct 45705 CCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAG 45764
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| || |||||||| || ||||| || || || || ||||| | ||||
Sbjct 45765 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGTTGCTGGTCGGGGGGA 45824
Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778
| || |||||||||| ||| ||
Sbjct 45825 ATGCCCTCCTTGTCCTGGATCTT 45847
>seq87
Length=93243
Score = 113 bits (124), Expect = 4e-20
Identities = 149/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| || || || | ||||| || || ||| |||||| || |||||||| || ||
Sbjct 5719 CCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAA 5660
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || ||||||||||| ||||| || || ||||| ||||| | |||
Sbjct 5659 AGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 5600
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||||| ||| || ||| ||| | | | ||| ||||| ||||| ||
Sbjct 5599 ATACCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATAGTATCGCTGGACTCAAC 5541
Query 41815 CTCCACCGTTATCGTTTTACCCGT 41838
||| | || || ||||| || ||
Sbjct 5540 CTCAAGGGTGATGGTTTTGCCAGT 5517
Score = 109 bits (120), Expect = 5e-19
Identities = 110/143 (77%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || |||||||| | || || || || ||| |||||||||||| |||||||| |||
Sbjct 6003 CCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAG 5944
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| || |||||||| || ||||| || || || || ||||| | ||||
Sbjct 5943 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGTTGCTGGTCGGGGGGA 5884
Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778
| || |||||||||| ||| ||
Sbjct 5883 ATGCCCTCCTTGTCCTGGATCTT 5861
>seq23
Length=393977
Score = 105 bits (116), Expect = 6e-18
Identities = 108/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
||| || || || || || | || || || || || ||||||||| ||||| || ||
Sbjct 298308 ACCACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATC 298367
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
||||| ||||| | || |||||||||||||||||||| ||||||||||| ||||| |
Sbjct 298368 CGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGG 298427
Query 41752 GGGAACGCTCTCCTTGTCCAT 41772
||| | | ||||||||| ||
Sbjct 298428 GGGGATACCCTCCTTGTCTAT 298448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462302514848400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |