Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20flavigenum_20[genbank_20GCA_5F002072365.1_202017-03- 24] 260 sequences; 32,903,267 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1 196 5e-45 seq24 123 3e-23 seq13 107 2e-18 >seq1 Length=2003574 Score = 196 bits (216), Expect = 5e-45 Identities = 214/284 (75%), Gaps = 3/284 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| |||||||| || || |||||||| | |||||| | || || Sbjct 759251 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCATTCTGGACAGCTGAGGAGATTGATCTC 759310 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || ||||| ||||||| | ||| |||||||| | ||||| | |||||| Sbjct 759311 TCTAAGGATCTTCACGACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTCATCTCC 759370 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| |||||||| ||||| ||| ||||||||| ||||||||||| || || |||||| Sbjct 759371 CACGTCCTGGCCTTCTTCGCGGCCTCCGACGGCATTGTCAACGAGAACCTTGTTGAGCGT 759430 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | ||||| ||||| ||||||| || |||||||||||||| |||||| ||| Sbjct 759431 TTCAGTGCAGAGGTCCAGGTCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGATG 759490 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916 |||||| | ||||| || | || || ||||||||||| || Sbjct 759491 GAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGACACCTA 759534 >seq24 Length=433882 Score = 123 bits (136), Expect = 3e-23 Identities = 138/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || ||||| || ||||| ||| |||| ||||| | | ||||| | | Sbjct 269007 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 268948 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| |||||||||||| | ||||| || || || Sbjct 268947 GACAACG-TCAAGACCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAACAGCGCCT 268889 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| ||||| ||||| || || | |||||||| | ||||||||||||||||| Sbjct 268888 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGTGACTACAACATCCAGAA 268829 Query 40878 GG 40879 || Sbjct 268828 GG 268827 >seq13 Length=710550 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || |||||||| ||||| || || || |||| ||||| | || Sbjct 344109 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAGACTATTACACTCGAGGTCGAGTCATCC 344050 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||| || || | || || |||||||| || | || || Sbjct 344049 GACACTATCGATAATGTGAAGTCCAAGATCCAAGATAAGGAGGGCATTCCTCCCGATCAA 343990 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| ||||| ||||| || || | || || ||| |||||||||| Sbjct 343989 CAGCGTCTCATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGTACACTCTCCGACTACAAC 343930 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||| |||| || || || || Sbjct 343929 ATCCAGAAGGAATCCACCCTCCACCTTGT 343901 Score = 107 bits (118), Expect = 2e-18 Identities = 149/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| ||||||||| | || || || ||| ||| | | | | |||| ||||| Sbjct 344598 TCACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAACG-TCAAG 344540 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || || | ||||| ||||| ||||| | ||||| || || | |||| ||| ||| Sbjct 344539 TCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAACAGCGTTTGATCTTCGCCGGC 344480 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || |||||||| |||| ||||| || |||||| ||||||||||||||| | || || Sbjct 344479 AAGCAGCTGGAGGACGGTCGCACGCTTTCCGACTATAACATCCAGAAGGAGTCTACTCTC 344420 Query 40891 CATCTAGTGTTGCGCTTGAGGGGCGG 40916 || || || | ||| | | ||||| Sbjct 344419 CACCTGGTTCTTCGCCTCCGTGGCGG 344394 Score = 104 bits (114), Expect = 2e-17 Identities = 141/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759 |||| || || || || || || |||||||| |||| || || | | |||| | | Sbjct 344327 TCGTCAAGACCCTGACCGGAAAGACCATCACTCTCGAGGTTGAGTCATCTGACACCATCG 344268 Query 40760 A-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | |||| | ||| || |||| ||||| |||||||| ||| | |||||||| || || Sbjct 344267 ACAACGTT-AAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTT 344209 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 || | ||| ||||| ||| |||| |||| || || || |||||||||||||||||| Sbjct 344208 ATTTTCGCCGGCAAGCAGTTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAA 344149 Query 40879 GAGGCCACGCTGCA 40892 ||| |||| || || Sbjct 344148 GAGTCCACTCTACA 344135 Score = 100 bits (110), Expect = 3e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| || ||| | ||||| || || || |||| ||| || || |||||||| Sbjct 343788 GACAAGGAGGGTATTCCCCCTGACCAACAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAG 343729 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| || || || |||||||||||||||||||| ||| ||||| || |||||| Sbjct 343728 GACGGACGTACTCTTTCGGACTACAACATCCAGAAGGAAAGCACCCTGCACCTGGTGTTG 343669 Query 40903 CGCTTGAGGGGCGGC 40917 || || | |||||| Sbjct 343668 CGTCTGCGTGGCGGC 343654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515217525537600