Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20flavigenum_20[genbank_20GCA_5F002072365.1_202017-03- 24] 260 sequences; 32,903,267 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq5 167 3e-36 seq1 98.7 1e-15 >seq5 Length=1140520 Score = 167 bits (184), Expect = 3e-36 Identities = 728/1141 (64%), Gaps = 12/1141 (1%) Strand=Plus/Minus Query 62948 AGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 63007 ||| ||||| ||||| || || ||||||| || | |||| | ||||||||||| Sbjct 974871 AGAAGCCAGGTTACAAACAGCCACCTCATCAGGGGCACTGTATTCAACGATCTCAGTGCA 974812 Query 63008 AAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 63067 || ||| | ||||| || | || | || |||||||| |||| || ||||| Sbjct 974811 CAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCCTGTTGCAGGCATC 974752 Query 63068 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 63127 ||| || || ||||| || ||||||| || |||| | || | ||| || | ||||| Sbjct 974751 CTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATACCAGA- 974693 Query 63128 GACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTC-TCTT--TCGTATAGAGTATACA 63183 | || ||||||| || | ||| || | | |||| || ||| | || | Sbjct 974692 GCTTCTGAGCCTTGATGGTC---TTGCGTCCACGGCCCTCTTGCTCATATTTGGCGTAGA 974636 Query 63184 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCA 63243 ||||||||||| || |||||| ||| | || |||| || || | | Sbjct 974635 GAGCATCGAACTCGTCACCGTAAACATCAGCCAGGCCGGGGGCCTCATTGGGGCAGAAGA 974576 Query 63244 ACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-T 63302 | ||| || |||| ||| || || ||||| |||||||| || |||| | ||| | Sbjct 974575 GTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGGGTCCACAAAGCGT 974516 Query 63303 ATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 63362 | ||| || || | | | | ||||| || || ||||| || |||||||| Sbjct 974515 AGAAA-AGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGGTCGAGGAAT 974457 Query 63363 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTT 63422 | | | ||||| |||||||| |||||||| ||||| | | ||||| || ||||| Sbjct 974456 TCGAAGACATCAGCGTGCCACGGCTCCAAGTAGATGGCAAAGGCACCAGGGCGCTTGTTA 974397 Query 63423 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 63482 || ||||| || | || | |||||||| ||| | || | || ||| |||| ||||||| Sbjct 974396 CCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACCG 974337 Query 63483 TTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGAT 63542 || || || ||||| || ||| || || | || ||||| || Sbjct 974336 TTGGAGGAGCCGTTGGTTCCACCGATGTAAGAACCGGTAGCGCGAATGCGGTGAACATTC 974277 Query 63543 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATG 63602 ||||| || || || || | || ||||| | || || || | || |||||||| Sbjct 974276 AGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAGATA 974217 Query 63603 CCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTA 63662 || || ||||| || || |||||| || || || || | | ||| | | | | Sbjct 974216 CCCTCAATGCTGTCCGCGCTCATGTCAACCAGGAAGCAAGATGCAAGCTGGGGTTGGGGA 974157 Query 63663 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 63722 || | ||||| || | || || |||||||| || || | || | || | | | | Sbjct 974156 GTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAAGTACTTCTGGGACATCAAGTGG 974097 Query 63723 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63782 || |||||||| || || || ||| || || || || || |||||||| | | Sbjct 974096 TATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATACCGACAGCAACACGCATCAGC 974037 Query 63783 ATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63842 | |||||| || | ||| ||| || ||| || | | ||| || || | Sbjct 974036 AAGTGCTGGGGACGCTCAGCAACGGTGCCGTTAATCCGAAGGAGGTATGAACGCTCGAGG 973977 Query 63843 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGC 63902 || || || || || ||||||| ||||| || ||||| | ||| |||| |||||| Sbjct 973976 GTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGAGTTGAGC 973917 Query 63903 TTATCCTTATATTTGTTAACTATATCCATGGTAATAC-TTGAAATAATCGGAGAATGTTT 63961 | || || || |||| || | ||| || | | |||| || || |||| | | || Sbjct 973916 TCCTCGGCATGCTTCATAACAATCT-CATAGTGCTCCTTTGAGATCATAGGAGCAGGCTT 973858 Query 63962 CCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttt 64021 || || || || ||||| | | | | ||| || || | ||| | ||||| Sbjct 973857 ATTGTTCTTGGGGTTCACATAATGGTAAAGATCGGAGATGACCATAGAGAATTGCTTTTT 973798 Query 64022 tGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081 ||||| |||||| || || || | ||| || | || || |||||||| || || || || Sbjct 973797 TGTTTGCTTGTGGAGGTTCGAAACGGCGATACGAGCAGCCAGAATGGCGTAGTCAGGGTG 973738 Query 64082 T 64082 | Sbjct 973737 T 973737 >seq1 Length=2003574 Score = 98.7 bits (108), Expect = 1e-15 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| || ||| ||||| || ||| || |||||||| | | || | ||||| || Sbjct 759872 AACAGCAGACAAGCGAAGTCAGTGTGGAGGCCCTCGTCACGAGAGATCAGCTCGTTGGAG 759813 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 || ||||| || ||||| ||||||||||| || ||||| || ||||| || || || || Sbjct 759812 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCAAAAGAGCCA 759753 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33726 || ||||| || || || || || || ||||||| Sbjct 759752 GAGAAGAAAATACCCTCGACAGCGGCGAAGGCAA 759719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629815553092800