Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20flavigenum_20[genbank_20GCA_5F002072365.1_202017-03- 24] 260 sequences; 32,903,267 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq5 170 3e-37 seq1 102 1e-16 >seq5 Length=1140520 Score = 170 bits (188), Expect = 3e-37 Identities = 735/1150 (64%), Gaps = 18/1150 (2%) Strand=Plus/Minus Query 71697 GGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCA---TATTGTATAAT 71753 ||| | ||| ||||| |||||||| || ||||||| || |||| |||| | || Sbjct 974877 GGCGAGAGAAGCCAGGTTACAAACAGCCACCTCATCAGG---GGCACTGTATTCAACGAT 974821 Query 71754 TTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 71813 |||||||| || ||| | || || || | || | || |||||||| |||| Sbjct 974820 CTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCCTGTT 974761 Query 71814 ACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 71873 || |||||||| || || || || || ||||||| || |||| | || | ||| || Sbjct 974760 GCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGAATGGC 974701 Query 71874 TTTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCT-CTTTTCTCTT--TCGTATT 71929 | ||||| | || ||||||| || | |||| || | ||||| || |||| Sbjct 974700 ATACCAGA-GCTTCTGAGCCTTGATGGT---CTTGCGTCCACGGCCCTCTTGCTCATATT 974645 Query 71930 GTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCG 71989 | || | ||||||||||| || || ||| | | || || ||||| | Sbjct 974644 TGGCGTAGAGAGCATCGAACTCGTCACCGTAAACATCAGCCAGGCCGGGGGCCTCATTGG 974585 Query 71990 GACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCC 72049 | || | | || ||| || || | | | || || ||||| |||||||| || ||| Sbjct 974584 GGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGGGTCC 974525 Query 72050 AAAGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGA 72108 | | ||| || ||| || || | || | | |||||| || || ||||| || Sbjct 974524 ACAAAGCGTAGAAA-AGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGG 974466 Query 72109 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGC 72168 |||||||| | | | ||||| |||||||| |||||||| ||||| | | || || Sbjct 974465 TCGAGGAATTCGAAGACATCAGCGTGCCACGGCTCCAAGTAGATGGCAAAGGCACCAGGG 974406 Query 72169 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 72228 || ||||| || ||||| || | || | |||||||| ||| | || | || ||| ||| Sbjct 974405 CGCTTGTTACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCATAGGA 974346 Query 72229 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTG 72288 | |||||| ||||| | || ||||| || ||| || || | || ||||| | Sbjct 974345 ACAATACCGTTGGAGGAGCCGTTGGTTCCACCGATGTAAGAACCGGTAGCGCGAATGCGG 974286 Query 72289 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 72348 || ||||| || || || || | || ||||| | || || || | ||| Sbjct 974285 TGAACATTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTA 974226 Query 72349 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG 72408 |||||||| ||||| || || || | |||||| || || || || | | ||| Sbjct 974225 TCATAGATACCCTCAATGCTGTCCGCGCTCATGTCAACCAGGAAGCAAGATGCAAGCTGG 974166 Query 72409 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAC 72468 | | ||| | ||||| || | || || |||||||| || || | || | ||| Sbjct 974165 GGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAAGTACTTCTGGGAC 974106 Query 72469 AGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACA 72528 | | | ||| |||||||| || || || ||| || || || || || ||| Sbjct 974105 ATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATACCGACAGCAACA 974046 Query 72529 CGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGAT 72588 ||||| | || ||||| || | ||| | | || || || | | ||| || Sbjct 974045 CGCATCAGCAAGTGCTGGGGACGCTCAGCAACGGTGCCGTTAATCCGAAGGAGGTATGAA 973986 Query 72589 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACC 72648 || | || || || || || ||||||| ||||| || ||||| | ||| || Sbjct 973985 CGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCC 973926 Query 72649 GAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATAC-TTGAAATAATCGG 72707 || ||||| | || || || |||| || | ||| ||| | | |||| || || || Sbjct 973925 GAGTTGAGCTCCTCGGCATGCTTCATAACAATCT-CATAGTGCTCCTTTGAGATCATAGG 973867 Query 72708 AGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAA 72767 || | | || || || || || ||||| | | | | ||| || || | || Sbjct 973866 AGCAGGCTTATTGTTCTTGGGGTTCACATAATGGTAAAGATCGGAGATGACCATAGAGAA 973807 Query 72768 TAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATA 72827 | | |||||||||| |||||| || || || ||||| || | || || |||||||| || Sbjct 973806 TTGCTTTTTTGTTTGCTTGTGGAGGTTCGAAACGGCGATACGAGCAGCCAGAATGGCGTA 973747 Query 72828 ATCTGGATGT 72837 || || ||| Sbjct 973746 GTCAGGGTGT 973737 >seq1 Length=2003574 Score = 102 bits (112), Expect = 1e-16 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| || ||| ||||| || ||| || ||||| || | | || | |||||||| Sbjct 759872 AACAGCAGACAAGCGAAGTCAGTGTGGAGGCCCTCGTCACGAGAGATCAGCTCGTTGGAG 759813 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || ||||| || ||||| ||||||||||| || ||||| || || || ||||| || ||| Sbjct 759812 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCAAAAGAGCCA 759753 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAA 42209 || ||||| || || || || || || ||||||| Sbjct 759752 GAGAAGAAAATACCCTCGACAGCGGCGAAGGCAA 759719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137018797600