Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20flavigenum_20[genbank_20GCA_5F002072365.1_202017-03-
24] 260 sequences; 32,903,267 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq13 122 2e-22
seq1 104 5e-17
>seq13
Length=710550
Score = 122 bits (134), Expect = 2e-22
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| ||||| || || ||||| || || || | || ||||| || || || ||
Sbjct 343913 GTGGATTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCATCTTCAAGCTGCTTGCCT 343972
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | ||||||||| ||||| || || || ||||| || ||||| | ||
Sbjct 343973 GCGAAGATGAGACGCTGTTGATCGGGAGGAATGCCCTCCTTATCTTGGATCTTGGACTTC 344032
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | || ||| | || ||||| |||||||||||||| ||||| || ||
Sbjct 344033 ACATTATCGATAGTGTCGGATGACTCGACCTCGAGTGTAATAGTCTTGCCAGTGAGCGTC 344092
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 344093 TTGACGAAAATCTGCAT 344109
Score = 87.8 bits (96), Expect = 4e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|||| || || |||||||| || || ||||| || ||||| | |||||| || | ||
Sbjct 344135 TGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCCTCCAACTGC 344194
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| || || ||||| || | ||| || || || || || || || || |||||||||||
Sbjct 344195 TTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 344254
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| || || || || | ||| || | || ||||| || || || ||||| || ||
Sbjct 344255 GACTTAACGTTGTCGATGGTGTCAGATGACTCAACCTCGAGAGTGATGGTCTTTCCGGTC 344314
Query 104537 AGTGTTTTTAC 104547
|| || || ||
Sbjct 344315 AGGGTCTTGAC 344325
>seq1
Length=2003574
Score = 104 bits (114), Expect = 5e-17
Identities = 111/147 (76%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197
||||| || |||||||| || ||||| ||||| || || ||||||||| | ||||| |||
Sbjct 759718 GTTGCCTTCGCCGCTGTCGAGGGTATTTTCTTCTCTGGCTCTTTTGCCTCCATCTTCTGG 759777
Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257
||||||| | ||||| ||||| || | |||||||| ||||| |||| | |||
Sbjct 759778 CTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCTCGTGAC 759837
Query 269258 GAAGGTTTACACTGCGACTTCGCTTGT 269284
|| || | ||| ||||||||||||
Sbjct 759838 GAGGGCCTCCACACTGACTTCGCTTGT 759864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151394564404080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |