Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20flavigenum_20[genbank_20GCA_5F002072365.1_202017-03-
24] 260 sequences; 32,903,267 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq163 132 3e-26
seq18 102 5e-17
seq13 98.7 7e-16
>seq163
Length=7713
Score = 132 bits (146), Expect = 3e-26
Identities = 85/93 (91%), Gaps = 5/93 (5%)
Strand=Plus/Plus
Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958
|||||||||| ||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 2213 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 2272
Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||| ||||||||||||||||||||||||||||
Sbjct 2273 ATCCATTCATGCGCGTCACTAATTAGATGACGA 2305
>seq18
Length=604653
Score = 102 bits (112), Expect = 5e-17
Identities = 197/289 (68%), Gaps = 4/289 (1%)
Strand=Plus/Plus
Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258
||||| |||||||| ||| | | | || | || ||||||||||| ||||| |||||||
Sbjct 393297 TTCTATCGCTACAAGATG--GAGAAGCTCCAGGCTAAGGTCGAGGGCAAGGGTAACGGTA 393354
Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCT 6318
|||| ||||| | |||||| || || ||| || | ||| | || ||| | | |
Sbjct 393355 TTAAGACCGTTGTCGTCAACTTGAACTCGGTTGCTCAGTCCCTCAGTCGGCCTCCTGCTT 393414
Query 6319 ACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACG 6378
| | | || || ||||| | |||||||| || || | | | | | | |||
Sbjct 393415 ATCTCATCAAGTACTTCGGATTTGAACTTGGTGCCCAAGCCAACGCTAAGCCCTCTGACG 393474
Query 6379 AGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCT 6438
| || | ||| | ||||| || || || | ||||||| ||||| | || ||||| |
Sbjct 393475 ACCGTTGGATCATCAACGGTTCTCACGACGCCCCCAAGCTCCAGGATTACCTCGACGGTT 393534
Query 6439 TTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
| ||| |||||||||||| || | | ||| | ||||| ||||||||
Sbjct 393535 TCATTTCCAAGTTTGTGCTATGCAAGAAGTGCAAGAACCCCGAGACCGA 393583
>seq13
Length=710550
Score = 98.7 bits (108), Expect = 7e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
|| || | || ||||||||||| || || ||||| ||||| || || ||||| || ||
Sbjct 343655 CCGCCACGCAGACGCAACACCAGGTGCAGGGTGCTTTCCTTCTGGATGTTGTAGTCCGAA 343714
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| | |||| |||| || | || || || || || || || || ||||| || | |||
Sbjct 343715 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGTTGGTCAGGGGGA 343774
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| || || |||||| || || ||| || || | || ||| ||| || || ||
Sbjct 343775 ATACCCTCCTTGTCCTGGATCTTGCTCTTAACGTTGTCGATAGTGTCTGAGCTCTCGACC 343834
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| || ||||| || || ||||| || || || || ||||||||
Sbjct 343835 TCTAGCGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCAT 343881
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946138636060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |