Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20flavigenum_20[genbank_20GCA_5F002072365.1_202017-03- 24] 260 sequences; 32,903,267 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq163 132 3e-26 seq18 102 5e-17 seq13 98.7 7e-16 >seq163 Length=7713 Score = 132 bits (146), Expect = 3e-26 Identities = 85/93 (91%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| ||||||||||||||||||||||||||||||| || |||||||||| Sbjct 2213 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 2272 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| |||||||||||||||||||||||||||| Sbjct 2273 ATCCATTCATGCGCGTCACTAATTAGATGACGA 2305 >seq18 Length=604653 Score = 102 bits (112), Expect = 5e-17 Identities = 197/289 (68%), Gaps = 4/289 (1%) Strand=Plus/Plus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258 ||||| |||||||| ||| | | | || | || ||||||||||| ||||| ||||||| Sbjct 393297 TTCTATCGCTACAAGATG--GAGAAGCTCCAGGCTAAGGTCGAGGGCAAGGGTAACGGTA 393354 Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCT 6318 |||| ||||| | |||||| || || ||| || | ||| | || ||| | | | Sbjct 393355 TTAAGACCGTTGTCGTCAACTTGAACTCGGTTGCTCAGTCCCTCAGTCGGCCTCCTGCTT 393414 Query 6319 ACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACG 6378 | | | || || ||||| | |||||||| || || | | | | | | ||| Sbjct 393415 ATCTCATCAAGTACTTCGGATTTGAACTTGGTGCCCAAGCCAACGCTAAGCCCTCTGACG 393474 Query 6379 AGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCT 6438 | || | ||| | ||||| || || || | ||||||| ||||| | || ||||| | Sbjct 393475 ACCGTTGGATCATCAACGGTTCTCACGACGCCCCCAAGCTCCAGGATTACCTCGACGGTT 393534 Query 6439 TTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 | ||| |||||||||||| || | | ||| | ||||| |||||||| Sbjct 393535 TCATTTCCAAGTTTGTGCTATGCAAGAAGTGCAAGAACCCCGAGACCGA 393583 >seq13 Length=710550 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || | || ||||||||||| || || ||||| ||||| || || ||||| || || Sbjct 343655 CCGCCACGCAGACGCAACACCAGGTGCAGGGTGCTTTCCTTCTGGATGTTGTAGTCCGAA 343714 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | |||| |||| || | || || || || || || || || ||||| || | ||| Sbjct 343715 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGTTGGTCAGGGGGA 343774 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || |||||| || || ||| || || | || ||| ||| || || || Sbjct 343775 ATACCCTCCTTGTCCTGGATCTTGCTCTTAACGTTGTCGATAGTGTCTGAGCTCTCGACC 343834 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| || ||||| || || ||||| || || || || |||||||| Sbjct 343835 TCTAGCGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCAT 343881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946138636060