Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20flavigenum_20[genbank_20GCA_5F002072365.1_202017-03-
24] 260 sequences; 32,903,267 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq13 131 4e-25
seq24 111 4e-19
seq1 84.2 5e-11
>seq13
Length=710550
Score = 131 bits (144), Expect = 4e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || || || || | ||| ||| || ||||| || ||||||| |
Sbjct 343883 CCACCACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAG 343942
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || ||||| | || || ||||||||||| |||||||||||| ||
Sbjct 343943 AGTGTACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGGAGGA 344002
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || ||||| ||||| || | ||||| || || |||| ||| || || ||
Sbjct 344003 ATGCCCTCCTTATCTTGGATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGACC 344062
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| || || ||||| || || || ||||||||||| ||||||||
Sbjct 344063 TCGAGTGTAATAGTCTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 344109
Score = 127 bits (140), Expect = 5e-24
Identities = 151/201 (75%), Gaps = 8/201 (4%)
Strand=Plus/Plus
Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336
|||||||| || ||||| || ||||| | || || |||||||| || | || || ||
Sbjct 343685 GTGCTTTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCCAGCTGCTTACCA 343744
Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TT 288395
|||||||| ||||||||||| | || || || || || |||||||| || ||| ||
Sbjct 343745 GCGAAGATAAGACGCTGTTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTT-GCTCTT 343803
Query 288396 CACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAG 288452
||||| || |||| || |||| || || || |||||||| ||||| |||||||
Sbjct 343804 AACGTTGTCGATAGTGTCTGAGCTC---TCGACCTCTAGCGTGATAGTCTTTCCGGTCAA 343860
Query 288453 AGTCTTGACGAATATCTGCAT 288473
||||||||| || ||||||||
Sbjct 343861 AGTCTTGACAAAGATCTGCAT 343881
>seq24
Length=433882
Score = 111 bits (122), Expect = 4e-19
Identities = 132/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || ||||| || ||||| || || || | || || || |||||||||
Sbjct 268829 TTCTGGATGTTGTAGTCACTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 268888
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
|| |||||||| | ||||| || || || |||||||| || | || ||||| ||
Sbjct 268889 AGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 268948
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | |||||||| || || ||||| || || ||||| || ||||| |||||||||||
Sbjct 268949 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 269007
>seq1
Length=2003574
Score = 84.2 bits (92), Expect = 5e-11
Identities = 154/223 (69%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 269119 GAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAAT 269178
|||||| | ||||||| | || ||| || || | || ||||| || | || |||
Sbjct 759946 GAGTTCTTGACTGACGCTCTTCCCTGTGCTCTGCTTGGCATGAACTCCAAGCTGATGTGC 760005
Query 269179 CAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTAC 269238
|| || || || ||||| ||||| || | | ||| ||||| | |||| |||
Sbjct 760006 CAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTAC 760065
Query 269239 AATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTC 269298
|| | | |||||||||| ||| ||||| || || || | || ||||| ||||||
Sbjct 760066 AACGCTACCAATCCCTTCGACTTCATGGAGTCCATCTCTCTGGCCGGCAAGACCAACTTC 760125
Query 269299 TTCGAAAAGCGTGTCAGCGACTATCA-ACGTCCTGGTGTAATG 269340
||||| ||||||||| | ||||| || | | || ||||| |||
Sbjct 760126 TTCGAGAAGCGTGTCGGTGACTACCAGAAGGCC-GGTGTCATG 760167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179650470276280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |