Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20flavigenum_20[genbank_20GCA_5F002072365.1_202017-03- 24] 260 sequences; 32,903,267 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq6 82.4 6e-11 seq2 82.4 6e-11 >seq6 Length=944022 Score = 82.4 bits (90), Expect = 6e-11 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 52002 GACGGCAAGAAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGAC 52061 |||| | |||| |||||||||| | || | || ||| | ||| |||| || ||| Sbjct 480543 GACGACTTGAAGTTCGTCAAGGTTCGCATGCGTACTACCAAGATCCCCCAGATTGGTGAC 480484 Query 52062 AAGTTTGCGTCGT-TCACGGCGCAAAAGGGGACGTGCGGAGCCGTCCTGACC--CAGGAG 52118 ||||| || || |||||| || ||||| || || | ||| ||| |||||| Sbjct 480483 AAGTTCGCTTCTCGTCACGGT-CAGAAGGGTACCATTGGTATCA-CCT-ACCGACAGGAG 480427 Query 52119 GACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTT 52178 |||||||| ||| | ||| || || || ||||| || ||||| |||||||||||| || Sbjct 480426 GACATGCCTTTCACCCGGGAAGGTGTCGTTCCCGATCTGATCATTAACCCCCACGCCATT 480367 Query 52179 CCATCCAGGATGACC 52193 || ||| | |||||| Sbjct 480366 CCGTCCCGTATGACC 480352 >seq2 Length=1544334 Score = 82.4 bits (90), Expect = 6e-11 Identities = 257/398 (65%), Gaps = 0/398 (0%) Strand=Plus/Plus Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30048 ||||||||||| | | |||||||| || || ||||| || || |||| Sbjct 1118124 ACGTAAAACTGGGCGAACATATGGCACGGGGGCAGGGCCATCTTTTTCAGATCAGCGGGG 1118183 Query 30049 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 30108 ||||| |||| || ||||||||| | || ||||||| | | || ||| | Sbjct 1118184 TTCCACGCGCTCATGATGATGCGGCGATCGAAAGGGTTGTGAATAAGCTTGTGCACAACA 1118243 Query 30109 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCT 30168 | || ||||| || || ||| || ||||| || | | | ||| ||||| || Sbjct 1118244 TCTTTGAGCTGGTCGACACCCTGGCCGGAGTAATCCGTCTTGGCGTCGACATACTCGGCG 1118303 Query 30169 CCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCG 30228 || || |||| ||||||||| || ||||| ||||| | || || ||||| | ||| || Sbjct 1118304 CCAAAGTGCCGCCACTGGAATCCATACACGGGTCCTAAATCGCCTTCTTCACGGTGGCCG 1118363 Query 30229 AAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTC 30288 | ||| || |||| ||| || | | || || | ||||| ||||| | ||| Sbjct 1118364 AGGCCAGATTTATCCAGAAACTCGCGGCTTCCATTTCCATCCCAAATCTTAATCCCGGCT 1118423 Query 30289 TCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACG 30348 |||||||| ||| ||| | || || |||||| || || || | | ||| Sbjct 1118424 TCGGAGAGTGGGAGGGACGAGGTGCAACCAGAGATGAACCAGAGTAGTTCGGCGAGCACG 1118483 Query 30349 GCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30386 || |||||| | ||| || ||||||||||| || Sbjct 1118484 GCGCGTAGAAAGACTCGCTTCGTGGTGAGGAGGGGCAA 1118521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408616305192980