Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20flavigenum_20[genbank_20GCA_5F002072365.1_202017-03- 24] 260 sequences; 32,903,267 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq13 105 4e-17 >seq13 Length=710550 Score = 105 bits (116), Expect = 4e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| ||||| || || || ||| || | || || || | || || Sbjct 343888 ACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGTGT 343947 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||||||||| ||||| || || || || ||||| |||||||| |||||||| || Sbjct 343948 ACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGGAGGAATGCC 344007 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||| ||||| ||||| || ||| || ||||| || | || | | || | Sbjct 344008 CTCCTTATCTTGGATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGA-CCTCGA 344066 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | |||||||| || || ||||| ||||| |||||||| || Sbjct 344067 GTGTAATAGTCTTGCCAGTGAGCGTCTTGACGAAAATCTG 344106 Score = 86.0 bits (94), Expect = 4e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796 || || ||||||||||| || || || || || ||||| ||||| || || || || || Sbjct 49054 GCTGTCATTACTGTTCCTGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGACGCC 48995 Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856 || ||||| ||||| || || | ||||| ||||| || || || || || || || Sbjct 48994 GGTCTCATTGCCGGTCTCAACGTCCTCCGTATCATTAACGAGCCCACCGCCGCTGCCATT 48935 Query 474857 GCTTATGGTCTTGATAAGAA 474876 || || |||||||| ||||| Sbjct 48934 GCCTACGGTCTTGACAAGAA 48915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268168047338480