Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20flavigenum_20[genbank_20GCA_5F002072365.1_202017-03-
24] 260 sequences; 32,903,267 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq13 105 4e-17
>seq13
Length=710550
Score = 105 bits (116), Expect = 4e-17
Identities = 157/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
|||||||||||| ||||| || || || ||| || | || || || | || ||
Sbjct 343888 ACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGTGT 343947
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | ||||||||| ||||| || || || || ||||| |||||||| |||||||| ||
Sbjct 343948 ACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGGAGGAATGCC 344007
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
||||| ||||| ||||| || ||| || ||||| || | || | | || |
Sbjct 344008 CTCCTTATCTTGGATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGA-CCTCGA 344066
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| |||||||| || || ||||| ||||| |||||||| ||
Sbjct 344067 GTGTAATAGTCTTGCCAGTGAGCGTCTTGACGAAAATCTG 344106
Score = 86.0 bits (94), Expect = 4e-11
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796
|| || ||||||||||| || || || || || ||||| ||||| || || || || ||
Sbjct 49054 GCTGTCATTACTGTTCCTGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGACGCC 48995
Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856
|| ||||| ||||| || || | ||||| ||||| || || || || || || ||
Sbjct 48994 GGTCTCATTGCCGGTCTCAACGTCCTCCGTATCATTAACGAGCCCACCGCCGCTGCCATT 48935
Query 474857 GCTTATGGTCTTGATAAGAA 474876
|| || |||||||| |||||
Sbjct 48934 GCCTACGGTCTTGACAAGAA 48915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268168047338480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |