Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20flavigenum_20[genbank_20GCA_5F002072365.1_202017-03- 24] 260 sequences; 32,903,267 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq13 109 5e-19 >seq13 Length=710550 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | ||||| || ||||| ||||| || || || | | Sbjct 343881 ATGCAGATCTTTGTCAAGACTTTGACCGGAAAGACTATCACGCTAGAGGTCGAGAGCTCA 343822 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | || |||||| ||||| || || || || || || || Sbjct 343821 GACACTATCGACAACGTTAAGAGCAA-GATCCAGGACAAGGAGGGTATTCCCCCTGACCA 343763 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| ||| | ||||| || || || ||||||||||| | | | || || || || Sbjct 343762 ACAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACAA 343703 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||| || |||||| || || ||| |||||||||| |||| || ||| Sbjct 343702 CATCCAGAAGGAAAGCACCCTGCACCTGGTGTTGCGTCTGCGTGGCGGC 343654 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || ||||| || || || |||||||| ||||| || || | || Sbjct 344109 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAGACTATTACACTCGAGGTCGAGTCATCC 344050 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||| || || || || |||||||||||| Sbjct 344049 GACACTATCGATAATGTGAAGTCCAAGATCCAAGATAAGGAGGGCATTCCTCCCGATCAA 343990 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||||| || ||| | | | || || || ||| Sbjct 343989 CAGCGTCTCATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGTACACTCTCCGACTACAAC 343930 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 || || |||||||| || || ||| Sbjct 343929 ATCCAGAAGGAATCCACCCTCCAC 343906 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||| ||||| || || || ||||| || ||||| ||||||||||| ||||| || Sbjct 344536 AAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAACAGCGTTTGATCTTCGCCGGCAAG 344477 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||||||||||| | | | || || |||||||| || ||||| || || || ||| Sbjct 344476 CAGCTGGAGGACGGTCGCACGCTTTCCGACTATAACATCCAGAAGGAGTCTACTCTCCAC 344417 Query 24908 TTGGT 24912 |||| Sbjct 344416 CTGGT 344412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896137832800