Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20flavigenum_20[genbank_20GCA_5F002072365.1_202017-03-
24] 260 sequences; 32,903,267 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq13 111 4e-19
seq5 87.8 4e-12
>seq13
Length=710550
Score = 111 bits (122), Expect = 4e-19
Identities = 142/196 (72%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || || || ||||| || |||||| | || || || |||||||| ||||
Sbjct 344323 CAAGACCCTGACCGGAAAGACCATCACTCTCGAGGTTGAGTCATCTGACACCATCGACAA 344264
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| |||||||| || || || || ||| || ||| || | ||||| ||
Sbjct 344263 CGTTAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTTATTTT 344204
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|||||| ||||||||||| || || | ||| || |||| |||||| |||||||||||||
Sbjct 344203 CGCCGGCAAGCAGTTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAAGAGTC 344144
Query 206364 TACTCTTCACCTTGTT 206379
||||| ||| | |||
Sbjct 344143 CACTCTACACTTGGTT 344128
>seq5
Length=1140520
Score = 87.8 bits (96), Expect = 4e-12
Identities = 167/246 (68%), Gaps = 0/246 (0%)
Strand=Plus/Minus
Query 173106 GGCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTG 173165
||| |||||||||| |||||||| ||||| ||| | || ||| | | |||| |
Sbjct 974757 GGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATA 974698
Query 173166 CCAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATA 173225
||| || | || || || | ||| | | | | || |||| || ||| | | ||
Sbjct 974697 CCAGAGCTTCTGAGCCTTGATGGTCTTGCGTCCACGGCCCTCTTGCTCATATTTGGCGTA 974638
Query 173226 GAGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAA 173285
||| | ||||| || | ||||||| || | || ||||| || || || || || ||
Sbjct 974637 GAGAGCATCGAACTCGTCACCGTAAACATCAGCCAGGCCGGGGGCCTCATTGGGGCAGAA 974578
Query 173286 GAGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGC 173345
||| |||| | || | || ||| || | |||||||||||| |||| ||||| | ||
Sbjct 974577 GAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGGGTCCACAAAGC 974518
Query 173346 GTAGAA 173351
||||||
Sbjct 974517 GTAGAA 974512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181816863059460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |