Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20flavigenum_20[genbank_20GCA_5F002072365.1_202017-03- 24] 260 sequences; 32,903,267 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq13 111 4e-19 seq5 87.8 4e-12 >seq13 Length=710550 Score = 111 bits (122), Expect = 4e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || ||||| || |||||| | || || || |||||||| |||| Sbjct 344323 CAAGACCCTGACCGGAAAGACCATCACTCTCGAGGTTGAGTCATCTGACACCATCGACAA 344264 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| |||||||| || || || || ||| || ||| || | ||||| || Sbjct 344263 CGTTAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTTATTTT 344204 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| ||||||||||| || || | ||| || |||| |||||| ||||||||||||| Sbjct 344203 CGCCGGCAAGCAGTTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAAGAGTC 344144 Query 206364 TACTCTTCACCTTGTT 206379 ||||| ||| | ||| Sbjct 344143 CACTCTACACTTGGTT 344128 >seq5 Length=1140520 Score = 87.8 bits (96), Expect = 4e-12 Identities = 167/246 (68%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 173106 GGCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTG 173165 ||| |||||||||| |||||||| ||||| ||| | || ||| | | |||| | Sbjct 974757 GGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATA 974698 Query 173166 CCAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATA 173225 ||| || | || || || | ||| | | | | || |||| || ||| | | || Sbjct 974697 CCAGAGCTTCTGAGCCTTGATGGTCTTGCGTCCACGGCCCTCTTGCTCATATTTGGCGTA 974638 Query 173226 GAGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAA 173285 ||| | ||||| || | ||||||| || | || ||||| || || || || || || Sbjct 974637 GAGAGCATCGAACTCGTCACCGTAAACATCAGCCAGGCCGGGGGCCTCATTGGGGCAGAA 974578 Query 173286 GAGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGC 173345 ||| |||| | || | || ||| || | |||||||||||| |||| ||||| | || Sbjct 974577 GAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGGGTCCACAAAGC 974518 Query 173346 GTAGAA 173351 |||||| Sbjct 974517 GTAGAA 974512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181816863059460