Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20flavigenum_20[genbank_20GCA_5F002072365.1_202017-03- 24] 260 sequences; 32,903,267 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq13 183 7e-41 seq24 131 4e-25 seq5 118 2e-21 >seq13 Length=710550 Score = 183 bits (202), Expect = 7e-41 Identities = 166/209 (79%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || ||||| || ||| || || |||||||| || |||| ||| || | ||| || ||| Sbjct 343673 ACCAGGTGCAGGGTGCTTTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCC 343732 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 |||||||| || ||||||||||| || ||||||||||| |||| || |||||||||||| Sbjct 343733 AGCTGCTTACCAGCGAAGATAAGACGCTGTTGGTCAGGGGGAATACCCTCCTTGTCCTGG 343792 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| || ||||| ||||| ||||| ||||| || ||||| || ||||| |||||| Sbjct 343793 ATCTTGCTCTTAACGTTGTCGATAGTGTCTGAGCTCTCGACCTCTAGCGTGATAGTCTTT 343852 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || | |||||| ||||| | |||||| Sbjct 343853 CCGGTCAAAGTCTTGACAAAGATCTGCAT 343881 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||||||||| || ||||| || || |||||||| || || | || || Sbjct 343888 ACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGTGT 343947 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| |||||||||||||||||||| || || ||||| || ||||||| || Sbjct 343948 ACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGGAGGAATGCC 344007 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||| || |||||||| ||||| || ||||| ||||| || || |||||||| Sbjct 344008 CTCCTTATCTTGGATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGACCTCGAG 344067 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || ||||| ||||| || || | |||||| Sbjct 344068 TGTAATAGTCTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 344109 Score = 167 bits (184), Expect = 5e-36 Identities = 157/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| |||||||||||||| |||||||| || || | || || | || || Sbjct 344126 AGAACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCC 344185 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||||||| ||||| ||||| || || ||||| || |||| || ||||||||| Sbjct 344186 TCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 344245 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| |||||||||||||| ||||||||||||||||| ||| Sbjct 344246 TGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCAACCTCGAGAGTGATGGTC 344305 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 ||||| || || ||||| || Sbjct 344306 TTTCCGGTCAGGGTCTTGAC 344325 Score = 154 bits (170), Expect = 3e-32 Identities = 148/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| ||||| ||||| || ||||||||||| || | ||| || | || || Sbjct 344409 AGAACCAGGTGGAGAGTAGACTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGACCGTCC 344468 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| | || |||||||||||||| | || ||||||||| Sbjct 344469 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGGATACCCTCCTTGTCC 344528 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||| || | |||||||| || ||||| ||| Sbjct 344529 TGGATCTTCGACTTGACGTTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTC 344588 Query 211083 TTTCCCGTGA 211092 || || |||| Sbjct 344589 TTGCCAGTGA 344598 >seq24 Length=433882 Score = 131 bits (144), Expect = 4e-25 Identities = 139/182 (76%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || ||||| | ||||| || ||||||||||| |||||||| Sbjct 268829 TTCTGGATGTTGTAGTCACTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 268888 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 ||||| ||||||||||| || | || ||||||||||||||||| || ||||| ||| Sbjct 268889 AGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 268948 Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 |||||||| ||| || || ||||| || || ||||| ||||| || ||||| || Sbjct 268949 ATGGTGTC---GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 269005 Query 211104 AA 211105 || Sbjct 269006 AA 269007 >seq5 Length=1140520 Score = 118 bits (130), Expect = 2e-21 Identities = 191/275 (69%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 178093 GTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCCCAC 178152 |||||| ||||| ||||| ||| |||||| ||||| |||||||| | || Sbjct 974784 GTTCTTCTGGTTACTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGT 974725 Query 178153 CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGC 178212 ||| | || ||| |||||||| || ||| |||| ||| || || ||||| | Sbjct 974724 CTCGGTCTGGGCCTCGAGAATGGCATACCAGAGCTTCTGAGCCTTGATGGTCTTGCGTCC 974665 Query 178213 TTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATC 178272 || || | ||| || || |||||| | ||||| || || || |||||| | Sbjct 974664 ACGGCCCTCTTGCTCATATTTGGCGTAGAGAGCATCGAACTCGTCACCGTAAACATCAGC 974605 Query 178273 GAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTT 178332 || ||||| |||||||||||||||||||| |||| | ||||| ||| || || || Sbjct 974604 CAGGCCGGGGGCCTCATTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTT 974545 Query 178333 CATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAA 178367 ||||||||| || | |||||| | || ||||||| Sbjct 974544 CATGAAGAGATCGGGGGTCCACAAAGCGTAGAAAA 974510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159148138574900