Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1558 116 4e-21 seq1258 98.7 1e-15 >seq1558 Length=100248 Score = 116 bits (128), Expect = 4e-21 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| || ||| ||||| || ||| ||||||||||| | | || | |||||||| Sbjct 40886 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 40945 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || ||||| || ||||| || |||||||| || ||||| || ||||| || ||||| ||| Sbjct 40946 AAAGTGAGACCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCA 41005 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 24279 || ||||| || || || || || |||||||||| Sbjct 41006 GAGAAGAAGATACCCTCGACAGCGGCAAAGGCAA 41039 >seq1258 Length=190882 Score = 98.7 bits (108), Expect = 1e-15 Identities = 549/871 (63%), Gaps = 22/871 (3%) Strand=Plus/Plus Query 53804 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATC 53863 || |||||||| ||||| || |||||||| || || ||||| || ||||||| ||| || Sbjct 143832 TGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTC 143891 Query 53864 TGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTT 53923 |||| || | ||| || | ||||| ||||||| || | || | | Sbjct 143892 TGGGCCTCAAGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTC--TTGCGGCCACGGC 143949 Query 53924 TCTCTT--TCGTA--TAGTGTATACA--ATCGTTCAAACTCGTCTCCCCAAACATTGTCC 53977 ||| | ||||| | | ||| | | |||| ||||| || || | |||| || Sbjct 143950 CCTCCTGCTCGTACTTCGCGTAGAGAGCATCG----AACTCATCACCGTAGACATCAGCC 144005 Query 53978 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 54037 | || || || | || || | | | ||| || |||| ||| || || ||| Sbjct 144006 AGACCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTC 144065 Query 54038 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 54097 || |||||||| || |||| | ||| || || || | | | | ||||| || Sbjct 144066 ATGAAGAGATCGGGTGTCCACAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTA 144125 Query 54098 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 54157 || ||||| |||||||||||| | | | ||| | |||||||| |||| ||| Sbjct 144126 CCGTGGTTCTTACGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAG 144185 Query 54158 ATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 54217 |||| | | ||||| || ||||| || ||||| || | || | || ||||| ||| Sbjct 144186 ATGGCAAATGCACCAGGGCGCTTGTTGCCACCCTGGTCGACATAGCGTGCAGTGTTGTTA 144245 Query 54218 TAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTT 54277 | || | || ||| |||| |||||| ||||| | || ||||| || || || Sbjct 144246 AACACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAA 144305 Query 54278 CCACTGGCACGAATA--TTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTA 54335 || | || |||||| | ||| ||||| || || || || | || ||||| | Sbjct 144306 CCGGTAGCGCGAATACGGTGGACATT--CAGACCGATACCACCAGCGGTCTTGGAGATCA 144363 Query 54336 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 54395 || || || | ||||| || || ||||| || || ||| | ||| | || | Sbjct 144364 TGGCACAGGTCTTGAGAGTATCGTAAATACCCTCAATGCTGTCAGCGCTCACATCAACCA 144423 Query 54396 GAAAACAGCTAGAC---ATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 54452 | | ||| |||| | ||| | | ||| | ||||| || | ||| || || | Sbjct 144424 GGA---AGCAAGACGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAAAAGGGTGGGGGAGG 144480 Query 54453 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCC 54512 |||| || || | || | || | | | ||| ||||| || || || |||||| Sbjct 144481 CGTGGGTGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATATCCT 144540 Query 54513 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 54572 || ||||| || || |||||||| | || ||||||||| | ||| | | ||| Sbjct 144541 CGCCGTGGATTCCGACAGCAACACGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGC 144600 Query 54573 TGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 54632 ||| || || | || || || | || || || || || ||||||| | Sbjct 144601 CGTTAATGCGAAGAAGATATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGA 144660 Query 54633 AGTCTCGTTCGTAAATAATAACTGAGTTGAG 54663 |||| || ||||| | ||| | |||||||| Sbjct 144661 AGTCACGGTCGTACACAATGGCAGAGTTGAG 144691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593707328417040