Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1755 143 2e-29 seq1056 111 1e-19 seq1358 87.8 2e-12 >seq1755 Length=4973 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || || |||| | |||||||| ||||| || || ||||| |||||||||||||| Sbjct 2861 CCACCACGTAGACGCAACACCAGGTGGAGGGTGGATTCTTTCTGAATGTTGTAATCAGAA 2920 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||| || |||||| ||||| || ||||| |||||||||||||||| || ||||| Sbjct 2921 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGAGGG 2980 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || ||||||||||| || || || || | || | |||||| | |||||| ||| Sbjct 2981 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACC 3040 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || | || || ||||||| ||| || ||||| || ||||| Sbjct 3041 TCGAGCGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 3087 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || |||| | |||||||| ||||| || || ||||| |||||||||||||| Sbjct 3087 TACCACCACGTAGACGCAACACCAGGTGGAGGGTGGATTCTTTCTGAATGTTGTAATCAG 3146 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || |||||| ||||| || || ||| |||||||||||||||| || |||| Sbjct 3147 AAAGAGTACGGCCATCCTCCAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCAGGAG 3206 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || |||||||| ||| ||| || || || | |||| ||||| | ||||| Sbjct 3207 GAATACCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGA 3266 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | || ||||| || || || || || ||||||||||| Sbjct 3267 CTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 3315 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| ||||||||| || ||||||||||||||| || ||||| ||| || ||||| Sbjct 3626 GTGGAGTGTAGACTCCTTCTGAATGTTGTAATCGGACAGGGTGCGGCCATCTTCAAGCTG 3685 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || || || |||| | |||||||| || ||||| ||||| ||||| || Sbjct 3686 CTTGCCGGCAAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCTTCCTTATC 3736 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| |||||||| ||||| ||| | ||| || ||| || || || Sbjct 3340 GTGGAGCGTTGACTCCTTTTGAATATTGTAGTCGGAAAGAGTACGGCCATCTTCAAGTTG 3399 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || || |||| | |||||||| ||||| || ||||||||||| || || || Sbjct 3400 CTTGCCGGCAAAGATCAAGCGCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATCTT 3459 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 ||||| | |||| || || || ||||||||| | ||| | ||||| || || Sbjct 3460 CGACTTAACATTGTCGATAGTATCGCTGGACTCGACCTCAAGGGTGATGGTTTTTCCAGT 3519 Query 118715 CAGAGTTTTTAC 118726 ||| || || || Sbjct 3520 CAGGGTCTTGAC 3531 >seq1056 Length=49498 Score = 111 bits (122), Expect = 1e-19 Identities = 136/182 (75%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||||||| ||||| |||||||||||| ||||| ||| |||| Sbjct 46213 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 46272 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTT 118668 |||||||| || || || || ||||||||||||| ||| | | || || || || | | Sbjct 46273 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGA--TCTTGGTCTTGACGTTGT 46330 Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728 ||| |||||| | |||||| |||| ||| | || || || ||||| || || || | Sbjct 46331 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 46390 Query 118729 AA 118730 || Sbjct 46391 AA 46392 >seq1358 Length=111181 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || ||||||||||| | |||||| |||||||||||| || || Sbjct 81650 GTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCG 81709 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 ||| |||| || ||||| || || ||||| || ||||||||||||| Sbjct 81710 GCGAAGATCAGGCGCTGTTGGTCAGGAGGAATACCCTCCTTGTCTG 81755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433820232506716