Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1755 123 3e-23 seq1056 96.9 4e-15 >seq1755 Length=4973 Score = 123 bits (136), Expect = 3e-23 Identities = 172/237 (73%), Gaps = 8/237 (3%) Strand=Plus/Plus Query 42951 TATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAA 43010 || || || || | || ||||||||||| || | ||| || || ||||| |||||| Sbjct 2855 TACTGGCCACCACGTAGACGCAACACCAGGTGGAGGGTGGATTCTTTCTGAATGTTGTAA 2914 Query 43011 TCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 43070 |||| ||||| || | || || |||||||||||||| || ||||| ||||||||||| Sbjct 2915 TCAGAAAGAGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCA 2974 Query 43071 GCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCT 43126 | || | | |||||||||| ||| || |||| ||| | | | ||||| ||| Sbjct 2975 GGAGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGA-CGTTGTCAATGGTGTCTGAGCT 3033 Query 43127 CGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || |||| |||||| || || || || | ||||| |||||||||||||| Sbjct 3034 C---TCAACCTCGAGCGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 3087 Score = 93.3 bits (102), Expect = 5e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || | || ||||||||||| || | ||| || || ||||| |||||||||| Sbjct 3089 CCACCACGTAGACGCAACACCAGGTGGAGGGTGGATTCTTTCTGAATGTTGTAATCAGAA 3148 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || |||||||| || ||||| ||||| ||||||||||| | || Sbjct 3149 AGAGTACGGCCATCCTCCAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCAGGAGGA 3208 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | |||||| | | ||| | || | || | | | | |||||| || || || Sbjct 3209 ATACCCTCCTTAT-CTTGAATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGAC 3267 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | || || || ||||| || |||||||| || || || ||||| Sbjct 3268 TTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 3315 Score = 86.0 bits (94), Expect = 7e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||||||||| || | ||||| || | || || || ||||| || || || Sbjct 3352 CTCCTTTTGAATATTGTAGTCGGAAAGAGTACGGCCATCTTCAAGTTGCTTGCCGGCAAA 3411 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | ||||||||||||| || | || |||||| ||| ||| || || | | Sbjct 3412 GATCAAGCGCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATCTTCGACTTAACATT 3471 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | || ||||| || || || || | ||||||||||| || || || ||||| || Sbjct 3472 GTCGATAGTATCGCTGGACTCGACCTCAAGGGTGATGGTTTTTCCAGTCAGGGTCTTGAC 3531 >seq1056 Length=49498 Score = 96.9 bits (106), Expect = 4e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || ||| || || | || || |||||||| || ||||| | Sbjct 46211 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 46270 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||| ||||| | || | || |||||||||| ||| || |||| ||| | Sbjct 46271 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 46329 Query 43114 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || ||||||| || ||||| || ||||| || ||||| || Sbjct 46330 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 46389 Query 43173 AA 43174 || Sbjct 46390 AA 46391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571803854934440