Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1258 118 1e-21 seq1558 116 5e-21 >seq1258 Length=190882 Score = 118 bits (130), Expect = 1e-21 Identities = 678/1072 (63%), Gaps = 26/1072 (2%) Strand=Plus/Plus Query 63024 ATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAT 63083 ||||| || | || | || |||||||| ||||| || |||||||| || || ||||| Sbjct 143814 ATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAG 143873 Query 63084 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTAT 63142 || ||||||| ||| |||| | || | ||| || | ||||| | || ||||||| || Sbjct 143874 GGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAGA-GCTTCTGAGCCTTGAT 143932 Query 63143 TATAGATTTGTATCTCCTTTCTCTT--TCGTA--TAGAGTATACAATCGTTCGAACTCGT 63198 | || | | ||| | ||||| | | ||| | | |||||||| | Sbjct 143933 GGTC--TTGCGGCCACGGCCCTCCTGCTCGTACTTCGCGTAGAGAGCA--TCGAACTCAT 143988 Query 63199 CTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 63258 | || | |||| ||| | || || | || || | | | ||| || |||| Sbjct 143989 CACCGTAGACATCAGCCAGACCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGT 144048 Query 63259 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTG 63318 ||| || || ||||| |||||||| || |||| | ||| || || || | | Sbjct 144049 TGGCCTCAACACGCTTCATGAAGAGATCGGGTGTCCACAAAGCGTAGAAGAGGTCACGAG 144108 Query 63319 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63378 | | ||||| || || ||||| |||||||||||| | | | ||| | | Sbjct 144109 CGCGAACCTCCTCCTTACCGTGGTTCTTACGCAGATCGAGGAACTCGAAGACATCGGCGT 144168 Query 63379 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63438 ||||||| |||| ||| ||||| | | ||||| || ||||| || ||||| || | | Sbjct 144169 GCCACGGCTCCAGGTAGATGGCAAATGCACCAGGGCGCTTGTTGCCACCCTGGTCGACAT 144228 Query 63439 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGG 63498 | | || ||||| ||| | || | || ||| |||| ||||||||| || || |||| Sbjct 144229 AGCGTGCAGTGTTGTTAAACACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGG 144288 Query 63499 TACCGGAGATATAGCCTCCACTGGCACGAATA--TTACTAATTGATAGACCTATTCCCCC 63556 | || || || || | || |||||| | ||| ||||| || || || Sbjct 144289 TTCCACCAATGTAAGAACCGGTAGCGCGAATACGGTGGACATT--CAGACCGATACCACC 144346 Query 63557 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATC 63616 || | || ||||| | || || || | || || || || || || ||||| || Sbjct 144347 AGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAAATACCCTCAATGCTGTC 144406 Query 63617 ATCGATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGGTGACGAGTAGTTCCCGCATT 63673 | || ||| | || || | ||| |||| | ||| | | | ||| | ||||| Sbjct 144407 AGCGCTCACATCAACCAGGA---AGCAAGACGCAAGCTGGGGCTGGGGAGTAGCGGCATT 144463 Query 63674 AAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT 63733 || | ||| || || ||||| || || | || | || | | | ||| |||||||| Sbjct 144464 GAAAAGGGTGGGGGAGGCGTGGGTGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAAT 144523 Query 63734 AGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 63793 || || |||||| || ||||| || || |||||||| | || ||||||||| Sbjct 144524 GGCCTTCTCAATATCCTCGCCGTGGATTCCGACAGCAACACGCATCAGCAAGTGCTGAGG 144583 Query 63794 TCTTTCAACAATTTTGTTGTTTATTTTCAACAAG-TAGGATTTTTCCAAAGTTTTAAAAC 63852 | ||| ||| ||| | ||| | || ||| || || || | || || || | Sbjct 144584 ACGCTCAGCAACATTGCCG-TTAATGCGAAGAAGATATGAACGCTCGAGGGTCTTGAATC 144642 Query 63853 CAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTAT 63912 | || ||||||| ||||| || ||||| | ||| | || ||||||| || || Sbjct 144643 CGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCAGAGTTGAGCTCCTCGGCAT 144702 Query 63913 ATTTGTTAACTATATC--CATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTT 63970 || |||| || || ||| | | |||| || || |||| | | || || || Sbjct 144703 GCTTCATAACGATCTCGTAATGTTCCT--TTGAGATCATAGGAGCAGGCTTATTGTTCTT 144760 Query 63971 AGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTT 64030 || || || |||| | | | ||| || || | ||| | ||||| |||| ||| Sbjct 144761 GGGGTTCACGTAGTGGTACAGATCGGAGATGACCATAGAGAATTGCTTTTTAGTTTGCTT 144820 Query 64031 GTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGT 64082 ||| || || || | ||| || | || || ||||| || || || || ||| Sbjct 144821 GTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATAGCGTAGTCGGGGTGT 144872 >seq1558 Length=100248 Score = 116 bits (128), Expect = 5e-21 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| || ||| ||||| || ||| ||||||||||| | | || | ||||| || Sbjct 40886 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 40945 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 || ||||| || ||||| || |||||||| || ||||| || ||||| |||||||| || Sbjct 40946 AAAGTGAGACCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCA 41005 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33726 || |||||||| || || || || |||||||||| Sbjct 41006 GAGAAGAAGATACCCTCGACAGCGGCAAAGGCAA 41039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629802460759440