Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1558 134 2e-26 seq1258 125 1e-23 >seq1558 Length=100248 Score = 134 bits (148), Expect = 2e-26 Identities = 161/218 (74%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || ||| ||||| || ||| ||||||||||| | | || || |||||||| Sbjct 40886 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 40945 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || ||||| || ||||| || |||||||| || ||||| || ||||| || ||||| ||| Sbjct 40946 AAAGTGAGACCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCA 41005 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CG 50127 || |||||||| || || || |||||||||||||| || | | | | | | || Sbjct 41006 GAGAAGAAGATACCCTCGACAGCGGCAAAGGCAACCAGACGCGAAGCGAAGGTTGACTCG 41065 Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 | ||| | |||||||| | ||||| | ||||||||| Sbjct 41066 CGGTCGTTGATCCACTTAAGGGCCCAGTTGGCCTTCTT 41103 >seq1258 Length=190882 Score = 125 bits (138), Expect = 1e-23 Identities = 727/1151 (63%), Gaps = 22/1151 (2%) Strand=Plus/Plus Query 79615 GCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCA 79674 |||| || ||||| || || || || ||||||| || | || | | || ||| Sbjct 143733 GCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTGTACTCGACGATCTCA 143792 Query 79675 GTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 79734 ||||| ||||| | ||| || || | || | || |||||||| ||||| || Sbjct 143793 GTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAA 143852 Query 79735 GCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 79794 |||||||| || || ||||| || ||||||| ||| |||| | || | ||| || | | Sbjct 143853 GCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCGTAC 143912 Query 79795 CAGACGACTC-GAGCCTTTATTATAGACTTGTATCT-CTTTTCTCTT--TCGTATTGTGT 79850 |||| | || ||||||| || | |||| | | ||| | ||||| | | Sbjct 143913 CAGA-GCTTCTGAGCCTTGATGGT---CTTGCGGCCACGGCCCTCCTGCTCGTACTTCGC 143968 Query 79851 ATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACA 79910 || | |||||||| || || | ||||| | | || || |||| || || Sbjct 143969 GTAGAGAGCATCGAACTCATCACCGTAGACATCAGCCAGACCGGGGGCCTCGTTGGGGCA 144028 Query 79911 CATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAG 79970 | | | ||| || || | ||| || || ||||| |||||||| || |||| | Sbjct 144029 GAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGTGTCCACAA 144088 Query 79971 AGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 80030 ||| || || || | | | | |||||| || || ||||| |||||||| Sbjct 144089 AGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTACCGTGGTTCTTACGCAGATCGAG 144148 Query 80031 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTT 80090 |||| | | | ||| | |||||||| |||| ||| ||||| | | || || || || Sbjct 144149 GAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACCAGGGCGCTT 144208 Query 80091 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 80150 ||| || ||||| || | || | || ||||| ||| | || | || ||| |||| ||| Sbjct 144209 GTTGCCACCCTGGTCGACATAGCGTGCAGTGTTGTTAAACACACGCAGCATAGGAACAAT 144268 Query 80151 ACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA--TTACTA 80208 ||| ||||| | || ||||| || || || || | || |||||| | Sbjct 144269 ACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATACGGTGGAC 144328 Query 80209 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCA 80268 ||| ||||| || || || || | || ||||| | || || || | ||||| Sbjct 144329 ATT--CAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCG 144386 Query 80269 TAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGG 80325 || || ||||| ||||| ||| | ||| | || || | ||| |||| | ||| Sbjct 144387 TAAATACCCTCAATGCTGTCAGCGCTCACATCAACCAGGA---AGCAAGACGCAAGCTGG 144443 Query 80326 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAC 80385 | | ||| | ||||| || | ||| || || ||||| || || | || | ||| Sbjct 144444 GGCTGGGGAGTAGCGGCATTGAAAAGGGTGGGGGAGGCGTGGGTGAAGTACTTCTGGGAC 144503 Query 80386 AGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACA 80445 | | | ||| |||||||| || || |||||| || ||||| || || ||| Sbjct 144504 ATCAAGTGGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGGATTCCGACAGCAACA 144563 Query 80446 CGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAG-TAAGA 80504 ||||| | || ||||||||| | ||| | | ||| ||| | || ||| || || Sbjct 144564 CGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTG-CCGTTAATGCGAAGAAGATATGA 144622 Query 80505 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 80564 || | || || || || || ||||||| ||||| || ||||| | ||| | Sbjct 144623 ACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGC 144682 Query 80565 CGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATAC-TTGAAATAATCG 80623 |||||||| | || || || |||| | | | | || | | |||| || || | Sbjct 144683 AGAGTTGAGCTCCTCGGCATGCTTCATAACGATCT-CGTAATGTTCCTTTGAGATCATAG 144741 Query 80624 GAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAA 80683 ||| | | || || || || || || |||| | | | ||| || || | | Sbjct 144742 GAGCAGGCTTATTGTTCTTGGGGTTCACGTAGTGGTACAGATCGGAGATGACCATAGAGA 144801 Query 80684 ATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCAT 80743 || | ||||| |||| |||||| || || || ||||| || | || || | ||| || | Sbjct 144802 ATTGCTTTTTAGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATAGCGT 144861 Query 80744 AATCTGGATGT 80754 | || || ||| Sbjct 144862 AGTCGGGGTGT 144872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718251534613720