Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1558 150 3e-31 seq1258 125 1e-23 >seq1558 Length=100248 Score = 150 bits (166), Expect = 3e-31 Identities = 301/440 (68%), Gaps = 31/440 (7%) Strand=Plus/Minus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 ||||| || || ||||| || ||||| |||||||| || || || || ||||||| Sbjct 41043 CTGGTTGCCTTTGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTC 40984 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||| |||||||| || || ||||| || || || | |||||| | || ||||| Sbjct 40983 TGGCTGAAGAAGCGTGGTCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCTCGT 40924 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTGCGTCCC 125603 |||||||| || ||| |||||| || ||| ||||| || || | | | || ||| Sbjct 40923 GACGAGGGTCTCCACACTGACTTCGCTTGTCTGCTGTTCTCCCACATGAACCACCGCCCC 40864 Query 125604 GAGTGCA-GATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGA 125662 || || ||| | ||| || |||| | | ||| ||||| | || || Sbjct 40863 GACCCCAAGATG----GTTGA---GGCTATCATCGT------CGAGGCCGTCGGCATCGA 40817 Query 125663 ACAAGAGTTTCTAACCGAATCCCTACC----GGTCAGCATGATTGGCATGAACTGCAAGC 125718 || ||||| || || || | || || |||| || |||||||||||| ||||| Sbjct 40816 GCAGGAGTTCCTGACTGACGCTCTTCCCTGTGGTCTGC----TTGGCATGAACTCCAAGC 40761 Query 125719 TAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCA 125778 | |||||||||||||| ||||| || || || ||||| ||| | | | ||| || Sbjct 40760 TGATGTGCGAGTACATTGAGTTCGTCGCTGACCGTCTGCTG---GTGGCCCTCGGCAACA 40704 Query 125779 AGATTTAC---AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTA 125835 ||| ||| ||||| | || ||||| || |||||| ||| || |||| || | Sbjct 40703 AGAAGTACTATAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTAGCTGGCA 40644 Query 125836 AGACCAACTTTTTCGAGAAG 125855 |||||||||| ||||||||| Sbjct 40643 AGACCAACTTCTTCGAGAAG 40624 >seq1258 Length=190882 Score = 125 bits (138), Expect = 1e-23 Identities = 326/488 (67%), Gaps = 12/488 (2%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || || || | ||| ||||| |||| || |||||||| || Sbjct 144220 CAGGGTGGCAACAAGCGCCCTGGTGCATTTGCCATCTACCTGGAGCCGTGGCACGCCGAT 144161 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || |||| |||| || ||| || || |||| || || | ||| Sbjct 144160 GTCTTCGAGTTCCTCGATCTGCGTAAGAACCACGGTAAGGAGGAGGTTCGCGCTCGTGAC 144101 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA---CGACGGTGGC 97052 | || || || | ||| || ||| | ||||||||||| || | | |||||| Sbjct 144100 CTCTTCTACGCTTTGTGGACACCCGATCTCTTCATGAAGCGTGTTGAGGCCAACGGTG-- 144043 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||||| ||| | |||||| || | | ||||||||| | ||| || || || ||| Sbjct 144042 -ACTGGACCCTCTTCTGCCCCAACGAGGCCCCCGGTCTGGCTGATGTCTACGGTGATGAG 143984 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGC 97171 || || || ||| || |||||||| |||||||| || |||| | || | || Sbjct 143983 TTCGATGCTCTCTACGCGAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACCA-TCAAGGC 143925 Query 97172 ACGAGAA-CTGTGGAAGGCCA-TCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATT 97229 | |||| || ||| | |||| || ||| ||| ||| |||||||| | || | ||| Sbjct 143924 TC-AGAAGCTCTGGTACGCCATTCTTGA-GGCCCAGACTGAGACTGGTAACCCCTTCATG 143867 Query 97230 CTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGC 97289 |||||||||||| | || || || ||||| || |||| || || || Sbjct 143866 CTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCGCAGC 143807 Query 97290 TCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTT 97349 ||||| |||||||| || || || |||||| | || || ||| ||| || ||| Sbjct 143806 TCCAACCTGTGCACTGAGATCGTCGAGTACAGTGCCCCTGATGAGGTGGCTGTCTGCAAC 143747 Query 97350 CTGGCATC 97357 ||||| || Sbjct 143746 CTGGCTTC 143739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741041386789480