Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1755 125 2e-23 seq1558 98.7 2e-15 >seq1755 Length=4973 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || |||||||||||||| || || ||||| ||||| | || || || || || || || Sbjct 3119 GTGGATTCTTTCTGAATGTTGTAATCAGAAAGAGTACGGCCATCCTCCAGCTGCTTGCCT 3178 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || |||||||| || || || ||||| |||||||| | || Sbjct 3179 GCGAAGATGAGACGCTGCTGGTCAGGAGGAATACCCTCCTTATCTTGAATCTTGGACTTC 3238 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | || ||| | || || || |||||||||||||| ||||| || || Sbjct 3239 ACATTATCGATAGTGTCGGATGACTCGACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTC 3298 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 3299 TTCACGAAAATCTGCAT 3315 Score = 111 bits (122), Expect = 4e-19 Identities = 147/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || |||||||||||||| || || ||||| ||||| | || || || || || || ||| Sbjct 2891 GTGGATTCTTTCTGAATGTTGTAATCAGAAAGAGTACGGCCATCCTCCAGCTGCTTACCA 2950 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481 ||||| || || | ||| || |||||||| || || || || ||||| ||| ||||| || Sbjct 2951 GCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATC-TTGCTCTT 3009 Query 104482 TACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTG 104540 || || || | ||| || || | || ||||| || || |||||||| || || | | Sbjct 3010 GACGTTGTCAATGGTGTC-TGAGCTCTCAACCTCGAGCGTGATAGTCTTTCCGGTCAAAG 3068 Query 104541 TTTTTACAAATATCTGCAT 104559 | || ||||| || ||||| Sbjct 3069 TCTTGACAAAGATTTGCAT 3087 >seq1558 Length=100248 Score = 98.7 bits (108), Expect = 2e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 ||||| ||||||||||| || ||||| ||||| || || || || ||| | ||||| ||| Sbjct 41040 GTTGCCTTTGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTCTGG 40981 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 ||||||| | || || ||||| || | |||||||| ||||| |||| | ||| Sbjct 40980 CTGAAGAAGCGTGGTCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCTCGTGAC 40921 Query 269258 GAAGGTTTACACTGCGACTTCGCTTGT 269284 || ||| | ||| |||||||||||| Sbjct 40920 GAGGGTCTCCACACTGACTTCGCTTGT 40894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151370031342484