Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq1913 82.4 5e-11 >seq1913 Length=86704 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 71418 GGTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCCTT 71477 |||||| | ||| |||| |||||||||||| || || || ||||| || || || ||| Sbjct 69031 GGTCATACGGGACGGAATGGCGTGGGGGTTAATAATCAGATCGGGAACAACACCTTCCCG 69090 Query 71478 GTCGAAGGGCATGTCCTCCTG--GGTCAGGACAGCTCCGCAT-GTCCCCTTTTGCGCCGT 71534 ||| |||||||||||||| ||| ||| | | | || || ||||| || |||| Sbjct 69091 AGTGAAAGGCATGTCCTCCTGTCGGT-AGG--TGATACCAATGGTACCCTTCTG-ACCGT 69146 Query 71535 GA-ATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTGA 71593 || || || |||||||| || |||| ||| | ||| ||| | || | ||||||| Sbjct 69147 GACGAGAGGCGAACTTGTCACCAATCTGGGGGATCTTGGTGGTACGCATGCGAACCTTGA 69206 Query 71594 CGAGCTTCTTGCCATC 71609 ||| |||| | |||| Sbjct 69207 CGAACTTCAGGTCATC 69222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338756860517592