Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1265 179 6e-41 seq225 168 1e-37 >seq1265 Length=25541 Score = 179 bits (198), Expect = 6e-41 Identities = 202/268 (75%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || |||| ||||| | || || |||||||| |||||||||||||| |||| Sbjct 7325 CGCCAAGCGCCACCGCAAGATCT-TGCGCGACAACATCCAGGGAATCACCAAGCCCGCTA 7267 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | || ||||| || |||||||| || ||||||||| |||| | || | || || |||| Sbjct 7266 TTCGCCGTCTCGCCCGTCGTGGCGGTGTCAAGCGTATCTCCGCTATGATTTACGAGGAGA 7207 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | ||| | ||| |||||| || |||| |||| ||||||| || ||| || | Sbjct 7206 CCCGCGGTGTGCTCAAGTCCTTCCTTGAGTCCGTCATCCGTGATGCTGTCACCTACACTG 7147 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 |||||||||| |||||||| ||||| ||| | || ||||||| || | || || || | Sbjct 7146 AGCACGCTAAGCGTAAGACCGTCACTTCCCTCGACGTCGTCTACGCCCTCAAGCGCCAGG 7087 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTA 16698 |||||| | || ||||| || |||| Sbjct 7086 GCCGTACCCTCTACGGTTTCGGTGGTTA 7059 >seq225 Length=74468 Score = 168 bits (186), Expect = 1e-37 Identities = 189/250 (76%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| | | || || ||||| || ||||| |||||||| ||||| Sbjct 14526 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATTCAGGGAATTACCAAGCCCGCTAT 14468 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| || || |||||||| ||||||||| |||| | || |||| || |||| Sbjct 14467 CCGTCGTCTCGCACGCCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAGGAGAC 14408 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | |||| ||||||| || || |||| ||| ||| || ||| || || Sbjct 14407 CCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTCACCTACACTGA 14348 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||||||||| || | || | ||||| || | || || || || Sbjct 14347 GCACGCCAAGCGCAAGACTGTCACTTCTCTTGACGTTGTCTACGCTCTCAAGCGCCAGGG 14288 Query 16672 CCGTAAGATT 16681 ||||||| || Sbjct 14287 CCGTAAGTTT 14278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073441787639