Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1558 129 7e-25 seq1258 127 3e-24 >seq1558 Length=100248 Score = 129 bits (142), Expect = 7e-25 Identities = 121/154 (79%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || ||| ||||| || ||| ||||||||||| | | || || |||||||| Sbjct 40886 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 40945 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || ||||| || ||||| || |||||||| || ||||| || ||||| |||||||| ||| Sbjct 40946 AAAGTGAGACCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCA 41005 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33448 || |||||||| || || || || |||||||||| Sbjct 41006 GAGAAGAAGATACCCTCGACAGCGGCAAAGGCAA 41039 >seq1258 Length=190882 Score = 127 bits (140), Expect = 3e-24 Identities = 680/1071 (63%), Gaps = 24/1071 (2%) Strand=Plus/Plus Query 62973 ATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAT 63032 ||||| || | || | || |||||||| ||||| || |||||||| || || ||||| Sbjct 143814 ATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAG 143873 Query 63033 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTAT 63091 || ||||||| ||| |||| | || | ||| || | ||||| | || ||||||| || Sbjct 143874 GGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAGA-GCTTCTGAGCCTTGAT 143932 Query 63092 TATAGATTTGTATCTCCTTTCTCTT--TCGTA--TAGTGTATACAATCGTTCGAACTCGT 63147 | || | | ||| | ||||| | | ||| | | |||||||| | Sbjct 143933 GGTC--TTGCGGCCACGGCCCTCCTGCTCGTACTTCGCGTAGAGAGCA--TCGAACTCAT 143988 Query 63148 CTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 63207 | || | |||| ||| || || || | || || | | | ||| || |||| Sbjct 143989 CACCGTAGACATCAGCCAGACCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGT 144048 Query 63208 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGG 63267 ||| || || ||||| |||||||| || |||| | ||| || || || | | Sbjct 144049 TGGCCTCAACACGCTTCATGAAGAGATCGGGTGTCCACAAAGCGTAGAAGAGGTCACGAG 144108 Query 63268 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63327 | | ||||| || || ||||| |||||||||||| | | | ||| | | Sbjct 144109 CGCGAACCTCCTCCTTACCGTGGTTCTTACGCAGATCGAGGAACTCGAAGACATCGGCGT 144168 Query 63328 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63387 ||||||| |||| ||| ||||| | | ||||| || ||||| || ||||| || | | Sbjct 144169 GCCACGGCTCCAGGTAGATGGCAAATGCACCAGGGCGCTTGTTGCCACCCTGGTCGACAT 144228 Query 63388 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGG 63447 | | || ||||| ||| | || | || ||| |||| ||||||||| || || |||| Sbjct 144229 AGCGTGCAGTGTTGTTAAACACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGG 144288 Query 63448 TACCGGAGATATAGCTTCCACTGGCACGAATA--TTACTAATTGATAGACCTATTCCCCC 63505 | || || || || | || |||||| | ||| ||||| || || || Sbjct 144289 TTCCACCAATGTAAGAACCGGTAGCGCGAATACGGTGGACATT--CAGACCGATACCACC 144346 Query 63506 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATC 63565 || | || ||||| | || || || | || || || |||||||| ||||| || Sbjct 144347 AGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAAATACCCTCAATGCTGTC 144406 Query 63566 ATCGATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGGTGACGACTAGTTCCCGCATT 63622 | || ||| | || || | ||| |||| | ||| | | ||| | ||||| Sbjct 144407 AGCGCTCACATCAACCAGGA---AGCAAGACGCAAGCTGGGGCTGGGGAGTAGCGGCATT 144463 Query 63623 AAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT 63682 || | ||| || || ||||| || || | || | || | | | ||| |||||||| Sbjct 144464 GAAAAGGGTGGGGGAGGCGTGGGTGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAAT 144523 Query 63683 AGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 63742 || || |||||| || ||||| || || |||||||| | || ||||||||| Sbjct 144524 GGCCTTCTCAATATCCTCGCCGTGGATTCCGACAGCAACACGCATCAGCAAGTGCTGAGG 144583 Query 63743 TCTTTCAACGATCTTGTTGTTTATTTTCAACAAG-TAGGATTTTTCCAAAGTTTTAAAAC 63801 | ||| | | ||| | ||| | || ||| || || || | || || || | Sbjct 144584 ACGCTCAGCAACATTGCCG-TTAATGCGAAGAAGATATGAACGCTCGAGGGTCTTGAATC 144642 Query 63802 CAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTAT 63861 | || ||||||| ||||| || ||||| | ||| | |||||||| | || || Sbjct 144643 CGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCAGAGTTGAGCTCCTCGGCAT 144702 Query 63862 ATTTGTTAACTATATCCATGGTGATAC-TTGAAATAATCGGAGAATGTTTCCCATTTTTA 63920 || |||| || | | | || | | |||| || || |||| | | || || || Sbjct 144703 GCTTCATAACGATCT-CGTAATGTTCCTTTGAGATCATAGGAGCAGGCTTATTGTTCTTG 144761 Query 63921 GGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTG 63980 || || || |||| | | | ||| || || | ||| | ||||| |||| |||| Sbjct 144762 GGGTTCACGTAGTGGTACAGATCGGAGATGACCATAGAGAATTGCTTTTTAGTTTGCTTG 144821 Query 63981 TGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGT 64031 || || || || ||||| || | || || ||||| || || || || ||| Sbjct 144822 TGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATAGCGTAGTCGGGGTGT 144872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622932225906680