Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq1704 132 3e-26 seq535 127 1e-24 seq1847 107 1e-18 seq1755 84.2 1e-11 >seq1704 Length=5533 Score = 132 bits (146), Expect = 3e-26 Identities = 85/93 (91%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| ||||||||||||||||||||||||||||||| || |||||||||| Sbjct 25 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 84 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| |||||||||||||||||||||||||||| Sbjct 85 ATCCATTCATGCGCGTCACTAATTAGATGACGA 117 >seq535 Length=65830 Score = 127 bits (140), Expect = 1e-24 Identities = 84/93 (90%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| ||||||||||||||||||||||||||||||| || |||||||||| Sbjct 23730 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 23789 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||| |||||||||||||||||||||||||||| Sbjct 23790 ATCTATTCATGCGCGTCACTAATTAGATGACGA 23822 >seq1847 Length=89031 Score = 107 bits (118), Expect = 1e-18 Identities = 201/293 (69%), Gaps = 12/293 (4%) Strand=Plus/Minus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258 ||||| |||||||| ||| | | | || | || ||||||||||| ||||| ||||||| Sbjct 70027 TTCTATCGCTACAAGATG--GAGAAGCTCCAGGCTAAGGTCGAGGGCAAGGGCAACGGTA 69970 Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTA----AGGCGCTCGGACGCCCTGCC 6314 |||| ||||| | |||||| ||||| ||| | | | ||| | || ||| | Sbjct 69969 TTAAGACCGTTGTCGTCAAC----CTGAACTCGGTTGCCCAATCCCTCAGTCGGCCTCCT 69914 Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374 |||| | | || || ||||| | |||||||| || ||| | | | | | | Sbjct 69913 GCCTATCTCATTAAGTACTTCGGATTTGAACTTGGTGCCCAGGCCAACGCTAAGCCCTCT 69854 Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434 |||| || | ||| | ||||| || || || | ||||||| ||||| | || ||| Sbjct 69853 GACGATCGTTGGATCATCAACGGCTCTCACGACGCCCCCAAGCTCCAGGATTACCTCGAC 69794 Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 ||||| || ||||||||||||||| | | ||| | ||||| |||||||| Sbjct 69793 GGCTTCATCTCCAAGTTTGTGCTGTGCAAGAAGTGCAAGAACCCCGAGACCGA 69741 >seq1755 Length=4973 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||||||||||| || || ||| || || ||||| |||||||||| Sbjct 3087 TACCACCACGTAGACGCAACACCAGGTGGAGGGTGGATTCTTTCTGAATGTTGTAATCAG 3146 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | ||| | || || | || || || || || || || || || || || | | Sbjct 3147 AAAGAGTACGGCCATCCTCCAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCAGGAG 3206 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || || || || ||| || ||||||||| | || ||| || || | Sbjct 3207 GAATACCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGA 3266 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | ||||||||| || || || | || |||||||| |||||||| Sbjct 3267 CTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 3315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334939349989013