Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1558 116 5e-21 seq1258 116 5e-21 >seq1558 Length=100248 Score = 116 bits (128), Expect = 5e-21 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| || ||| ||||| || ||| ||||||||||| | | || | |||||||| Sbjct 40886 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 40945 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || ||||| || ||||| || |||||||| || ||||| || ||||| || ||||| ||| Sbjct 40946 AAAGTGAGACCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCA 41005 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 32805 || ||||| || || || || || |||||||||| Sbjct 41006 GAGAAGAAGATACCCTCGACAGCGGCAAAGGCAA 41039 >seq1258 Length=190882 Score = 116 bits (128), Expect = 5e-21 Identities = 667/1054 (63%), Gaps = 26/1054 (2%) Strand=Plus/Plus Query 62846 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 62905 || |||||||| ||||| || |||||||| || || ||||| || ||||||| ||| || Sbjct 143832 TGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTC 143891 Query 62906 TGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTT 62964 || | || | ||| || | ||||| | || ||||||| || | || | | Sbjct 143892 TGGGCCTCAAGAATGGCGTACCAGA-GCTTCTGAGCCTTGATGGTC--TTGCGGCCACGG 143948 Query 62965 TTCTCTT--TCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63020 ||| | ||||| | | ||| | | |||||||| || || | |||| ||| Sbjct 143949 CCCTCCTGCTCGTACTTCGCGTAGAGAGCA--TCGAACTCATCACCGTAGACATCAGCCA 144006 Query 63021 GTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63080 | || || || | || || | | | ||| || |||| ||| || || |||| Sbjct 144007 GACCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCA 144066 Query 63081 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTC 63140 | |||||||| || |||| | ||| || || || | | | | ||||| || | Sbjct 144067 TGAAGAGATCGGGTGTCCACAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTAC 144126 Query 63141 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 63200 | ||||| |||||||||||| | | | ||| | |||||||| |||| ||| | Sbjct 144127 CGTGGTTCTTACGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGA 144186 Query 63201 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 63260 |||| | | ||||| || ||||| || ||||| || | || | || ||||| ||| Sbjct 144187 TGGCAAATGCACCAGGGCGCTTGTTGCCACCCTGGTCGACATAGCGTGCAGTGTTGTTAA 144246 Query 63261 AAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTC 63320 | || | || ||| |||| |||||| ||||| | || ||||| || || || | Sbjct 144247 ACACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAAC 144306 Query 63321 CACTGGCACGAATA--TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 63378 | | || |||||| | ||| ||||| || || || || | || ||||| | Sbjct 144307 CGGTAGCGCGAATACGGTGGACATT--CAGACCGATACCACCAGCGGTCTTGGAGATCAT 144364 Query 63379 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 63438 || || || | ||||| || || ||||| || || ||| | ||| | || || Sbjct 144365 GGCACAGGTCTTGAGAGTATCGTAAATACCCTCAATGCTGTCAGCGCTCACATCAACCAG 144424 Query 63439 AAAACAGCTAGAC---ATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 63495 | ||| |||| | ||| | | ||| | ||||| || | ||| || || || Sbjct 144425 GA---AGCAAGACGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAAAAGGGTGGGGGAGGC 144481 Query 63496 GTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 63555 ||| || || | || | || | | | ||| |||||||| || || |||||| Sbjct 144482 GTGGGTGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATATCCTC 144541 Query 63556 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 63615 || ||||| || || |||||||| | || ||||||||| | ||| | | ||| Sbjct 144542 GCCGTGGATTCCGACAGCAACACGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCC 144601 Query 63616 GTTTATTTTCAACAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 63674 | ||| | || ||| || || || | || || || || || ||||||| | Sbjct 144602 G-TTAATGCGAAGAAGATATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGA 144660 Query 63675 AGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATC-- 63732 |||| || ||||| | ||| | |||||||| | || || || |||| | || Sbjct 144661 AGTCACGGTCGTACACAATGGCAGAGTTGAGCTCCTCGGCATGCTTCATAACGATCTCGT 144720 Query 63733 CATGGTAATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAA 63792 ||| | | |||| || |||||| | | || || || || || || |||| | | Sbjct 144721 AATGTTCCT--TTGAGATCATAGGAGCAGGCTTATTGTTCTTGGGGTTCACGTAGTGGTA 144778 Query 63793 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGC 63852 | ||| || || | ||| | ||||| |||| ||||| || || || ||||| Sbjct 144779 CAGATCGGAGATGACCATAGAGAATTGCTTTTTAGTTTGCTTGTGGAGGTTCGAAACGGC 144838 Query 63853 TATTCTAGCGGCTAGAATGGCATAATCCGGATGT 63886 || | || || ||||| || || || || ||| Sbjct 144839 GATACGTGCAGCCAGAATAGCGTAGTCGGGGTGT 144872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633616769070800