Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1755 105 6e-18 seq1056 84.2 2e-11 >seq1755 Length=4973 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| |||||||||||||| || | ||||| |||| || ||| || Sbjct 3087 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACTATCACGCTCGAGGTTGAGAGCTCA 3028 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| || ||| ||||| || || || || |||||||| Sbjct 3027 GACACCATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAG 2968 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| || || || | || |||| || ||| | |||||||| Sbjct 2967 CAGCGTCTCATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCTGATTACAAC 2908 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 ||||| ||||||||||| || || Sbjct 2907 ATTCAGAAAGAATCCACCCTCCA 2885 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || | || ||| | ||||| ||||| || Sbjct 3315 ATGCAGATTTTCGTGAAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCC 3256 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| ||||| | || | ||| || || || || ||||| |||||||| Sbjct 3255 GACACTATCGATAATGTGAAGTCCAAGATTCAA-GATAAGGAGGGTATTCCTCCTGACCA 3197 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || || || ||||| || | || |||| || ||| | |||||||| Sbjct 3196 GCAGCGTCTCATCTTCGCAGGCAAGCAGCTGGAGGATGGCCGTACTCTTTCTGATTACAA 3137 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 ||||| ||||||||||| || || Sbjct 3136 CATTCAGAAAGAATCCACCCTCCA 3113 Score = 100 bits (110), Expect = 2e-16 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070 || ||||| |||| || ||| ||||||| | || || ||||| || |||||||| Sbjct 3531 GTCAAGACCCTGACTGGAAAAACCATCACCCTTGAGGTCGAGTCCAGCGATACTATCGA- 3473 Query 25071 TCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTA 25128 || || ||| || ||| || || || || ||||| || ||||| ||||| | | Sbjct 3472 -CAATGTTAAGTCGAAGATCCAGGATAAGGAGGGCATTCCCCCCGACCAGCAGCGCTTGA 3414 Query 25129 TTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAG 25188 | ||||||||||| ||| | ||||||| || ||| | ||| |||||||||||||| | Sbjct 3413 TCTTTGCCGGCAAGCAACTTGAAGATGGCCGTACTCTTTCCGACTACAATATTCAAAAGG 3354 Query 25189 AATCCACGCTACA 25201 | || ||||| || Sbjct 3353 AGTCAACGCTCCA 3341 >seq1056 Length=49498 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||| |||| ||||| |||| || |||| || |||||| ||||| ||| Sbjct 46391 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 46332 Query 25068 GAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATT 25127 || | ||| || ||| ||||| || || ||||| |||||||||||||| | Sbjct 46331 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTCTG 46272 Query 25128 ATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 || || ||||| || || | || |||| ||||| || |||| ||||| || || || Sbjct 46271 ATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 46213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433317844281245