Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1755 136 3e-27 seq1358 93.3 4e-14 seq1056 86.0 5e-12 >seq1755 Length=4973 Score = 136 bits (150), Expect = 3e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||||| ||||| || || |||| || || || || | | | Sbjct 3087 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACTATCACGCTCGAGGTTGAGAGCTCA 3028 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || |||||||||||||| || || || || Sbjct 3027 GACACCATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAG 2968 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| || || ||| | |||||| ||| || | || ||||||||| Sbjct 2967 CAGCGTCTCATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCTGATTACAAC 2908 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 ||||| |||||||||||| | || | || ||||| Sbjct 2907 ATTCAGAAAGAATCCACCCTCCACCTGGTGTTGCG 2873 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || || || || | || |||||||| || | || Sbjct 3315 ATGCAGATTTTCGTGAAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCC 3256 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || || |||||||| |||||||||||||| || || || Sbjct 3255 GACACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGTATTCCTCCTGACCAG 3196 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | |||||| ||| || | || ||||||||| Sbjct 3195 CAGCGTCTCATCTTCGCAGGCAAGCAGCTGGAGGATGGCCGTACTCTTTCTGATTACAAC 3136 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| |||||||||||| | || | || ||||| | || || ||| Sbjct 3135 ATTCAGAAAGAATCCACCCTCCACCTGGTGTTGCGTCTACGTGGTGGT 3088 Score = 91.5 bits (100), Expect = 1e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || ||||| |||| ||||| || || ||| |||||| | ||| || | || Sbjct 3519 ACTGGAAAAACCATCACCCTTGAGGTCGAGTCCAGCGATACTATCGACAATGTTAAGTCG 3460 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || || |||||||| ||||| ||||| || || || | || ||||||||||| Sbjct 3459 AAGATCCAGGATAAGGAGGGCATTCCCCCCGACCAGCAGCGCTTGATCTTTGCCGGCAAG 3400 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 || | || ||| ||| || | ||||| ||||| |||||||| || || || Sbjct 3399 CAACTTGAAGATGGCCGTACTCTTTCCGACTACAATATTCAAAAGGAGTCAAC 3347 Score = 91.5 bits (100), Expect = 1e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || || ||| |||||| | ||| | |||| Sbjct 3805 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACGTCAAGTCG 3746 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || || ||||| || || || || || || || || | || ||||||||||| Sbjct 3745 AAGATCCAGGATAAGGAAGGCATCCCTCCTGACCAGCAGCGCTTGATCTTTGCCGGCAAG 3686 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | || ||| ||||||| | ||||||||||||||||| || || || || Sbjct 3685 CAGCTTGAAGATGGCCGCACCCTGTCCGATTACAACATTCAGAAGGAGTCTAC 3633 >seq1358 Length=111181 Score = 93.3 bits (102), Expect = 4e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 |||||||||||||||||| || || ||||| || || || || |||||||| ||| | || Sbjct 81754 AGACAAGGAGGGTATTCCTCCTGACCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGA 81695 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 |||| |||||| | || ||||||||||| || || || || ||| Sbjct 81694 GGATGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACC 81649 >seq1056 Length=49498 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || ||||| || | || || || || || | | ||| ||| | Sbjct 46392 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCAT 46333 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| | |||| || || || ||||||||||| ||||| || || ||||| ||||| Sbjct 46332 CGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTCT 46273 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || ||||| || ||| | |||||| ||||||| | ||| |||||||| || || Sbjct 46272 GATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 46213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419718163018495