Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1755 123 6e-23 seq1056 120 7e-22 >seq1755 Length=4973 Score = 123 bits (136), Expect = 6e-23 Identities = 160/220 (73%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| || | ||| || ||||| ||||| ||||||| Sbjct 3317 CCACCACGTAGACGAAGGACGAGGTGGAGCGTTGACTCCTTTTGAATATTGTAGTCGGAA 3376 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| | ||| || || || ||||||| ||||| || || ||| Sbjct 3377 AGAGTACGGCCATCTTCAAGTTGCTTGCCGGCAAAGATCAAGCGCTGCTGG---TCGGGG 3433 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || ||||||||||| |||| || || || || |||| |||||| || || Sbjct 3434 GGAATGCCCTCCTTATCCTGGATCTTCGACTTAACATTGTCGATAGTATCGCTGGACTCG 3493 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 || || || ||||| || || || ||||| |||||||||| Sbjct 3494 ACCTCAAGGGTGATGGTTTTTCCAGTCAGGGTCTTGACGA 3533 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| | ||| ||||| || | || || || || || || || | Sbjct 3599 CATG-CCACCACGGAGGCGAAGGACGAGGTGGAGTGTAGACTCCTTCTGAATGTTGTAAT 3657 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| || ||||| || ||||| | || || || || ||||||| ||||| || | Sbjct 3658 CGGACAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCAG 3717 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| ||||| ||||||||||| |||| || ||||| || |||| |||||| || | Sbjct 3718 GAGGGATGCCTTCCTTATCCTGGATCTTCGACTTGACGTTGTCGATAGTATCGCTGGACT 3777 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGT 288449 | || || || ||||| ||||| || || Sbjct 3778 CAACCTCAAGGGTGATGGTCTTGCCAGT 3805 Score = 96.9 bits (106), Expect = 8e-15 Identities = 164/234 (70%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| || || | | || || || | ||| |||||| || || || || || Sbjct 2858 TGGCCACCACGTAGACGCAACACCAGGTGGAGGGTGGATTCTTTCTGAATGTTGTAATCA 2917 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | || || || || || || | || || || || ||||| |||||||| || | Sbjct 2918 GAAAGAGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGA 2977 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATC---GCTCGA 288419 ||||| || || || |||||||| || ||| || ||||| || || | || |||| Sbjct 2978 GGGATACCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCAATGGTGTCTGAGCTC-- 3034 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||||||||| ||||| ||||||| ||||||||| || || ||||| Sbjct 3035 -TCAACCTCGAGCGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 3087 Score = 95.1 bits (104), Expect = 3e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| || || || || || | || || || || || || | || || |||||||| Sbjct 3124 TTCTTTCTGAATGTTGTAATCAGAAAGAGTACGGCCATCCTCCAGCTGCTTGCCTGCGAA 3183 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| |||||||| || | || || || || ||||| || || || | ||||| || Sbjct 3184 GATGAGACGCTGCTGGTCAGGAGGAATACCCTCCTTATCTTGAATCTTGGACTTCACATT 3243 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| ||| || || ||||| || || || ||||| || || || ||||| || Sbjct 3244 ATCGATAGTGTCGGATGACTCGACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCAC 3303 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 3304 GAAAATCTGCAT 3315 >seq1056 Length=49498 Score = 120 bits (132), Expect = 7e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| || ||||| || || || | || ||||| ||||||||| Sbjct 46213 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 46272 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 ||||||||||| | || || || || || |||||||| || | || ||||| || Sbjct 46273 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 46332 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | |||||||| || || ||||| || || ||||| || ||||| ||||||||||| Sbjct 46333 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 46391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179625335158794