Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1558 138 1e-27 seq1056 102 8e-17 seq1755 96.9 3e-15 >seq1558 Length=100248 Score = 138 bits (152), Expect = 1e-27 Identities = 351/527 (67%), Gaps = 33/527 (6%) Strand=Plus/Minus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-- 52383 || || ||| || ||| ||||| | ||||| | ||||||||| | |||| || Sbjct 41118 GTTCCCTGCATTGCCAAGAAGGCCAACTGGGCCCTTAAGTGGATCAA---CGACCGCGAG 41062 Query 52384 -CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442 | || | || ||| |||| ||||| ||| |||||||| | || || || ||| Sbjct 41061 TCAACCTTCGCTTCGCGTCTGGTTGCCTTTGCCGCTGTCGAGGGTATCTTCTTCTCTGGC 41002 Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502 || ||| ||||||| | | || | | || | ||||| || || || ||| | Sbjct 41001 TCATTCGCCTCCATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGTCTCACTTTCTCC 40942 Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT------CTAC 52556 |||||| |||| || || ||||| || || ||||| ||||| || || || || | Sbjct 40941 AACGAGCTGATCTCTCGTGACGAGGGTCTCCACACTGACTTCGCTTGTCTGCTGTTCTCC 40882 Query 52557 TACAAGA-----CGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCA 52611 ||| || ||| | |||| || || | || || || | ||| || Sbjct 40881 CACATGAACCACCGCCCC-GACCCCAAGATGG--TT-------GAGGCT-ATCATCGTC- 40834 Query 52612 AGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGG 52671 ||||| || | ||||| ||||||| | || | ||| || || | ||||| | Sbjct 40833 --GAGGCCGTCGGCATCGAGCAGGAGTTCCTGACTGACGCTCTTCCCTGTGGTCTGCTTG 40776 Query 52672 GCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGC 52731 |||||||| | || |||||||||||||| ||||| || || || |||||| ||||| Sbjct 40775 GCATGAACTCCAAGCTGATGTGCGAGTACATTGAGTTCGTCGCTGACCGTCTGCTGGTGG 40716 Query 52732 AGCTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATT 52790 ||||| || | | ||||||| |||||| ||| || || || || ||| | ||| Sbjct 40715 CCCTCGG-CAACAAGAAGTACTATAACGCTACCAACCCCTTCGACTTCATGGAGTCCATC 40657 Query 52791 TCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || || | |||||||||||||| ||||||||||| ||||| || || Sbjct 40656 TCCCTAGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 40610 >seq1056 Length=49498 Score = 102 bits (112), Expect = 8e-17 Identities = 135/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || |||||||| || || |||| ||| Sbjct 46211 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 46270 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | |||||||||||||| || || || || || ||||| || | || || || | ||| Sbjct 46271 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 46329 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| ||||| || || || Sbjct 46330 -TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 46388 Query 138603 AAAA 138606 ||| Sbjct 46389 GAAA 46392 >seq1755 Length=4973 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | |||||| || | || | | | || || || ||||||||||| || Sbjct 2860 GCCACCACGTAGACGCAACACCAGGTGGAGGGTGGATTCTTTCTGAATGTTGTAATCAGA 2919 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | |||||| ||||| || || ||||| | | |||| |||||||| ||||| ||||| Sbjct 2920 AAGAGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGAGG 2979 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || ||||| ||| || || | | || | |||||| | ||| || Sbjct 2980 GATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAAC 3039 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| ||| | || || || |||| ||| || ||||| || ||||| Sbjct 3040 CTCGAGCGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 3087 Score = 84.2 bits (92), Expect = 2e-11 Identities = 131/185 (71%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||||||||| ||||||||| | |||||| || || ||||| || |||| Sbjct 3348 TTGACTCCTTTTGAATATTGTAGTCGGAAAGAGTACGGCCATCTTCAAGTTGCTTGCCGG 3407 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | |||| | ||||| ||||| || || || || || || || ||| || || | Sbjct 3408 CAAAGATCAAGCGCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATCTTCGACTTAA 3467 Query 138539 -ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 |||| || | || ||| | ||||| ||||| | || | ||||| |||||||| || Sbjct 3468 CATTG-TCGATAGTATCGCTGGACTCGACCTCAAGGGTGATGGTTTTTCCAGTCAGGGTC 3526 Query 138598 TTTAC 138602 || || Sbjct 3527 TTGAC 3531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496250471092560