Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1755 131 2e-25 seq1056 127 2e-24 seq1358 93.3 5e-14 >seq1755 Length=4973 Score = 131 bits (144), Expect = 2e-25 Identities = 137/180 (76%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||| |||||||||||||| ||||| || | || || || ||||||||||| || Sbjct 3352 CTCCTTTTGAATATTGTAGTCGGAAAGAGTACGGCCATCTTCAAGTTGCTTGCCGGCAAA 3411 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||||||||||||||||| || | || |||||| ||| ||||||| ||| | | Sbjct 3412 GATCAAGCGCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATCTTCGACTTAACATT 3471 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | || ||||| || || || || | ||||||||||| || ||||| || || || Sbjct 3472 GTCGATAGTATCGCTGGACTCGACCTCAAGGGTGATGGTTTTTCCAGTCAGGGTCTTGAC 3531 Score = 116 bits (128), Expect = 4e-21 Identities = 139/186 (75%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || || || | |||| |||||| || || ||||| ||||| || ||||| | || || Sbjct 3621 ACGAGGTGGAGTGTAGACTCCTTCTGAATGTTGTAATCGGACAGGGTGCGGCCATCTTCA 3680 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||||||||| || ||||||||||||||||| | || | || ||||| ||| | Sbjct 3681 AGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGG 3740 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||||| ||| | | | || ||||| || || || || | |||||||| || Sbjct 3741 ATCTTCGACTTGA-CGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTT 3799 Query 46564 GCCCGT 46569 ||| || Sbjct 3800 GCCAGT 3805 Score = 109 bits (120), Expect = 6e-19 Identities = 170/239 (71%), Gaps = 8/239 (3%) Strand=Plus/Plus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 |||| | ||| || | || |||||||||||| || | || || || || || |||| Sbjct 2853 ATTACTGGCCACCACGTAGACGCAACACCAGGTGGAGGGTGGATTCTTTCTGAATGTTGT 2912 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 | || || ||||| || | || || |||||||| || || || || | |||||||||| Sbjct 2913 AATCAGAAAGAGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGT 2972 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---G 46534 | | || | | |||||||||| |||||| |||||| ||| | | | ||||| | Sbjct 2973 CAGGAGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGA-CGTTGTCAATGGTGTCTGAG 3031 Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || || | |||||| || || || |||| || || |||||||||||||| Sbjct 3032 CTC---TCAACCTCGAGCGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 3087 >seq1056 Length=49498 Score = 127 bits (140), Expect = 2e-24 Identities = 139/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| || ||||| | || ||||||||||| |||||||| | Sbjct 46211 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 46270 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| ||||| ||||| | || | || |||||||||| |||||| |||||| ||| | Sbjct 46271 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 46329 Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || ||||| | || ||||| || |||||||| || || || Sbjct 46330 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 46389 Query 46583 AA 46584 || Sbjct 46390 AA 46391 >seq1358 Length=111181 Score = 93.3 bits (102), Expect = 5e-14 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || |||||||| | || |||||||||||||||||||| Sbjct 81655 CTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 81714 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| |||||| ||||| | || | | ||||||||| Sbjct 81715 GATCAGGCGCTGTTGGTCAGGAGGAATACCCTCCTTGTC 81753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565224813081960