Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1755 111 1e-19 >seq1755 Length=4973 Score = 111 bits (122), Expect = 1e-19 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||| ||| | ||| ||||||||||||||| || || ||||| | || |||| Sbjct 2875 CAACACCAGGTGGAGGGTGGATTCTTTCTGAATGTTGTAATCAGAAAGAGTACGGCCATC 2934 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||||||| || || ||||| || || || |||||||| | || | ||||||||||| Sbjct 2935 CTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTC 2994 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| |||||| | || | || | |||||| |||| || || || Sbjct 2995 CTGGATCTTGCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCGAGCGTGATAGT 3054 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || | |||||| |||||||| |||||| Sbjct 3055 CTTTCCGGTCAAAGTCTTGACAAAGATTTGCATA 3088 Score = 95.1 bits (104), Expect = 8e-15 Identities = 153/218 (70%), Gaps = 8/218 (4%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||| ||| | ||| ||||||||||||||| || || ||||| | || |||| Sbjct 3103 CAACACCAGGTGGAGGGTGGATTCTTTCTGAATGTTGTAATCAGAAAGAGTACGGCCATC 3162 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||||||| || || || || || || || |||||||| | || | |||||||| || Sbjct 3163 CTCCAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCAGGAGGAATACCCTCCTTATC 3222 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTA 34944 |||||| || || || ||||||| || | ||| || || | || | Sbjct 3223 TTGAATCTTGGACTTCAC--AT--TATCGATAGTGTCGGATGACTCGACTTCAAGTGTAA 3278 Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || || ||||| |||||||| || ||||||||| Sbjct 3279 TAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCATA 3316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324625991704344