Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1258 187 7e-42 seq1114 125 2e-23 seq1913 91.5 4e-13 >seq1258 Length=190882 Score = 187 bits (206), Expect = 7e-42 Identities = 567/873 (65%), Gaps = 5/873 (1%) Strand=Plus/Plus Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687 ||||| || || |||||| ||||||||| || || || || || | ||||||||| Sbjct 143775 CTGTACTCGACGATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGG 143834 Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747 ||| || |||| |||||||||||||| || ||| | ||| | || ||||| |||| Sbjct 143835 TTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGG 143894 Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCC 155807 || || ||||| |||||| | | || || || |||| | | ||| ||| Sbjct 143895 GCCTCAAGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCCTCC 143954 Query 155808 GACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867 ||| || ||| || || | | | || |||||||| |||| ||| || ||| Sbjct 143955 TGCTCGTACTTCGCGTAGAGAGCATCGAACTCATCACCGTAGACATCAGCCAGACCGGGG 144014 Query 155868 CACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACA 155927 || | |||||| || || | ||| || | ||||||| ||| || | | Sbjct 144015 GCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGA 144074 Query 155928 TCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTC 155987 || | ||| | ||| ||||| ||||| | || |||||| | ||||| ||| Sbjct 144075 TCGGGTGTCCACAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTACCGTGGTTC 144134 Query 155988 TTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAA 156047 || || || || | ||| || | ||| | || |||||||| || || ||||| Sbjct 144135 TTACGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAT 144194 Query 156048 CTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCT 156104 |||| | |||| |||||||| || ||||| || ||||| || || || |||| Sbjct 144195 GCACCAGGGCGCTTGTTGCCACCCTGGTCGACATAGCGTGCAGTGTTGTTAAACACACGC 144254 Query 156105 AGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAG 156164 |||||||||| |||||| ||||| | ||| |||||||| | ||| | ||||| | | | Sbjct 144255 AGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCG 144314 Query 156165 CGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCC 156224 |||| | || | || || || |||||||| | || || || || || | Sbjct 144315 CGAATACGGTGGACATTCAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTC 144374 Query 156225 TTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAA 156284 || | ||||| | ||||||| ||||| ||| | || | || |||| || Sbjct 144375 TTGAGAGTATCGTAAATACCCTCAATGCTGTCAGCGCTCACATCAACCAGGAAGCAAGAC 144434 Query 156285 CTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATAC 156344 | || || | || || | || ||||| || || || | || || | || ||| Sbjct 144435 GCAAGCTGGGGCTGGGGAGTAGCGGCATTGAAAAGGGTGGGGGAGGCGTGGGTGAAGTAC 144494 Query 156345 TTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAG 156404 || | ||||| | | ||||||||| | |||||||| || ||||| || | | Sbjct 144495 TTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGGATTCCG 144554 Query 156405 ATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACT-CCATCAATTCGCAG 156463 | || || | |||| || |||||||||||||| ||| || | || | ||| || || Sbjct 144555 ACAGCAACACGCATCAGCAAGTGCTGAGGACGCTCAGCAA-CATTGCCGTTAATGCGAAG 144613 Query 156464 AAGGTATGCGCGTTCCAGAGTTTTAAACCCGAA 156496 ||| |||| || || || || || || ||||| Sbjct 144614 AAGATATGAACGCTCGAGGGTCTTGAATCCGAA 144646 >seq1114 Length=129471 Score = 125 bits (138), Expect = 2e-23 Identities = 180/253 (71%), Gaps = 8/253 (3%) Strand=Plus/Minus Query 302595 ACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACC 302654 |||||| || ||||||||| | || || ||||| |||||||| ||||| ||||||| Sbjct 64279 ACGCTGGATGTAACCAGTTTCGGCAGTCTTGACAGCAGTATCAATCAGACCTTCACGACC 64220 Query 302655 ACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGG----AGCTCT 302710 | |||| || |||||||| | ||| ||| | || | | | ||| || ||| Sbjct 64219 AGCCATGGCGTGGAAGAAGAACTC----GGTAGGAGTCAAGCCACGGAGGTATGAGTTCT 64164 Query 302711 CAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGT 302770 | ||||| ||||| | |||||| || | ||| |||||| ||||| || ||||| | | Sbjct 64163 CGACGAATCCACGGGACTCGGGAGAGTAATCGTCCTTGGTGAAGTGAGGAAGGGTACGAT 64104 Query 302771 TCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCA 302830 || ||||| | || |||||||| || || ||| ||| ||||||| | | ||| Sbjct 64103 ACTTGAAGCCGAACGGAATACGCTTGCCTTCCACGGACTGTTGTCCCACAAGGGCAGTCA 64044 Query 302831 TCTGCGAAATATT 302843 ||||||||||||| Sbjct 64043 TCTGCGAAATATT 64031 Score = 111 bits (122), Expect = 5e-19 Identities = 109/140 (78%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| ||||||||| | || ||||| |||||||| ||||||||| Sbjct 65076 AGAATTTCCTTGAGACGTGGAACACCAAGCGTGACGTT---CTTGGACGACACACCAGCA 65020 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 ||||||||||| ||||| || | |||||| | |||||||||||| || ||||||| Sbjct 65019 AAGTGGAAAGTGTTCAGTGTCATTTGAGTCGCGGGCTCACCAATAGACTGAGCCGCAAGA 64960 Query 301933 ATACCAACCATTTCTCCTGG 301952 | || |||||||| || || Sbjct 64959 ACGCCGACCATTTCGCCAGG 64940 >seq1913 Length=86704 Score = 91.5 bits (100), Expect = 4e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 |||||||| | |||||||||||||| ||||| || |||||||| ||||||||||| || Sbjct 68669 GCACCGTGGGCGATCATACAATCACGTTCCATCTCTCCGAAACGGAGACCACCATCACGG 68728 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGA 251574 || | |||||| | ||||| ||||| ||| Sbjct 68729 GCACGACCCTCCACGGGCTGGCGAGTCAGA 68758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471781336714051