Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1558 134 2e-25 seq1258 127 2e-23 seq1211 118 1e-20 seq1091 111 2e-18 seq1491 95.1 1e-13 seq1354 89.7 6e-12 >seq1558 Length=100248 Score = 134 bits (148), Expect = 2e-25 Identities = 177/243 (73%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || ||||| Sbjct 40601 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCTAGGGAGATG 40660 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | || |||| ||| | | ||||| | | | Sbjct 40661 GACTCCATGAAGTCGAAGGGGTTGGTAGCGTTATAGTACTTCTTGTTGCCGAGGGCCACC 40720 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||| ||||| ||||| ||||| ||||||| |||||| || || ||||||||| | Sbjct 40721 AGCAGACGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGAGTTCATGCCAAGC 40780 Query 868871 AGCGCCAC-CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929 || |||| || || | || ||| ||||| | |||||| |||||||||||||||| Sbjct 40781 AG-ACCACAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGCCTCGACGAT 40839 Query 868930 GAT 868932 ||| Sbjct 40840 GAT 40842 Score = 127 bits (140), Expect = 2e-23 Identities = 180/251 (72%), Gaps = 3/251 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||||||||| ||| | |||| | | ||| Sbjct 41255 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGGATCTGG 41314 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| |||| || || | ||||||||| || ||||||||| |||||| || Sbjct 41315 ACCTCGGAACTGAAACGCTCGACAAGGTTCTCGTTGACAATGCCGTCGGAGGCGGCAAAG 41374 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809 |||||||||||||| ||| |||| ||||| |||||| | | ||| ||||| | Sbjct 41375 AAAGCCAGGACGTGGGAGATGAAGTAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTCG 41434 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 | || | ||| || | ||||||||| ||||||| ||||| |||||||| ||| Sbjct 41435 TGGAGATCCTTGGAGAGATCGATCTCCTCGGCAGTCCAGAAAGAGGCTTCGGCCTTCTTG 41494 Query 869870 TACATCTCCCA 869880 ||||| | ||| Sbjct 41495 TACATTTGCCA 41505 Score = 107 bits (118), Expect = 2e-17 Identities = 141/195 (72%), Gaps = 9/195 (5%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| ||||| |||||| || | ||| || ||||| || || ||||| Sbjct 40915 ACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGACCACGCTT 40974 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| ||||| ||||||| | ||| ||| ||||| ||||| |||||||| |||||||| Sbjct 40975 CTTCAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGCGGCAAA 41034 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTG---TCGAGGCCCTCCTTGTTGATCCACTTCATCGC 869355 | | | || ||| || ||||| ||| || | |||||||||||| | || Sbjct 41035 GGCAACCAGACGCGAAGCGAAGGTTGACTCGCGGTC------GTTGATCCACTTAAGGGC 41088 Query 869356 CCAGTCGGCCTTTTT 869370 ||||| |||||| || Sbjct 41089 CCAGTTGGCCTTCTT 41103 >seq1258 Length=190882 Score = 127 bits (140), Expect = 2e-23 Identities = 292/443 (66%), Gaps = 8/443 (2%) Strand=Plus/Plus Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCTGGTTG 1628220 ||| ||||||||| ||||||||||||| | || | ||||||||||||| |||||| Sbjct 143779 ACTCGACGATCTCAGTGCACAGGTTGGAGCTGCGAA-TAGTACCCAGGTTCTTCTGGTTA 143837 Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280 | || |||| || ||||||| ||||||| |||| || ||||| |||| ||| Sbjct 143838 CTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCC 143897 Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCC-GCG--CGCGGCCCTNN 1628337 | | ||||| |||||| || | || | || ||| ||| | ||||||| Sbjct 143898 TCAAGAATGGCGTACCAGAGCTTCTGAGC---CTTGATGGTCTTGCGGCCACGGCCCTCC 143954 Query 1628338 NNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGC 1628397 || || | | |||||| || ||| ||||| Sbjct 143955 TGCTCGTACTTCGCGTAGAGAGCATCGAACTCATCACCGTAGACATCAGCCAGACCGGGG 144014 Query 1628398 GCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGG 1628457 |||||| || || ||||| | |||||| || || | | | || ||| ||||| Sbjct 144015 GCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGA 144074 Query 1628458 TCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 1628517 || ||||||| ||||| |||||||| || || || ||||||||| ||||||||| Sbjct 144075 TCGGGTGTCCACAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTACCGTGGTTC 144134 Query 1628518 TTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 1628577 || || ||||| | |||| | |||||||||||||||||||||||| |||||| Sbjct 144135 TTACGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAT 144194 Query 1628578 GCGCCCTTGCGCTTGCCGCCGCC 1628600 || || ||||||| ||| || Sbjct 144195 GCACCAGGGCGCTTGTTGCCACC 144217 >seq1211 Length=29443 Score = 118 bits (130), Expect = 1e-20 Identities = 121/157 (77%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || || ||| ||||||||||| | || || |||||| Sbjct 29293 GACAGCATCGGTGGAACCGTAACATGTGTGATCCGCAACGTGCCAGTTGGACTTGGCGAG 29234 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| ||||||| ||||| |||||| ||||| ||||| || ||| Sbjct 29233 CCCTGCTTCGACAAGCTCGAGGCTAAGCTCGGCCACGCGATGCTCAGCATCCCCGCAACC 29174 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||| |||||||| ||| ||| || |||| |||| Sbjct 29173 AAGGGCTTCGAGATCGGCTCCGGTTTCGGCGGCTGCG 29137 >seq1091 Length=42677 Score = 111 bits (122), Expect = 2e-18 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||||||| | || || ||| |||| ||||| | || |||||| | || || ||| Sbjct 12724 GCTGCCAACTACTTGGATATTAAGGCTCTCCTCGACGTCGGCTGCAAGACCGTCGCTAAC 12783 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||||||||| || ||||||||||| |||||||| |||||| || Sbjct 12784 ATGATCAAGGGCAAGTCCCCAGAGGAGATCCGTAAGACCTTCAACATCCAG 12834 >seq1491 Length=10865 Score = 95.1 bits (104), Expect = 1e-13 Identities = 248/370 (67%), Gaps = 19/370 (5%) Strand=Plus/Plus Query 1726685 TGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCG 1726744 || || || | |||||||| | |||||| | || | || | | |||||||||||| Sbjct 5419 TGGGGGTGCGAGGCGGCGCCGATGGCGTCCACGGCGACGGTCAAGTTACCGTCGGTGCCG 5478 Query 1726745 TTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCG 1726804 |||||| ||||||||| | | ||| |||| || | ||||||||| | ||| |||| Sbjct 5479 TTCTTGTAGCCGATGGGGAAGGACAGGCCCGAGGCGAGCTCGCGGTGAAGCTGAGACTCG 5538 Query 1726805 GTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCA---AATAAGGGGCCACC 1726861 || ||||| ||||| | |||||| | | ||||||||| | | | ||||| Sbjct 5539 GTGGTGCGGGCGCCGATCGCGCCCAGAGAGATCAGGTCTGCTAGGTACTGAGGGG----- 5593 Query 1726862 AGA-GGACT-GAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCA 1726919 ||| || | ||| | |||| ||| | ||| | || ||| | | || ||| Sbjct 5594 AGATGGTGTCGAGCATCTCGGAGGCGATGGGGAG-TC--CGGTGCTGGTCAGGTCGGTGT 5650 Query 1726920 ACAG---GCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGG 1726976 |||| ||| | ||||| ||| || | | | | | | | | |||||| |||| Sbjct 5651 ACAGCTTACGG-GAGACGC--GCAGACCCTTGTTGATGTTGAAGGTCTCGTCGATATCGG 5707 Query 1726977 GGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCA 1727036 | ||| || || |||||||| ||||| || ||||| ||||| || | ||||| |||| Sbjct 5708 GATCGTTGATGAGTCCCTTCCAGCCGACCGTTGTGCGGGGCTTCTCCAGGTAGGCACGCA 5767 Query 1727037 TGACCACGCA 1727046 ||| |||||| Sbjct 5768 TGATCACGCA 5777 >seq1354 Length=17629 Score = 89.7 bits (98), Expect = 6e-12 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 18099 TGGCGAGTCGCACGGGGCGGGC-GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGC 18157 ||||||||| ||| | || | |||||||| ||| ||||||| || || | | Sbjct 536 TGGCGAGTCCCACTGT-CGCTCTGTCGGCTGTATCGTCGACGGATGTCCTCCAGGACTAG 478 Query 18158 CACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCAC 18217 ||| | ||||||||||| |||||||| || |||||||| || ||||| |||| | Sbjct 477 AACTCACTGAGGCCGACATTCAGCCTCAAATGACCCGGCGCCGTCCCGGCCAAAGCGCCC 418 Query 18218 TTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCC 18277 || | || ||||| ||||| || || ||| |||||||| ||||| ||| |||| Sbjct 417 TTACTACCCCGCGAGACGAGAAGGACCGAGTCGAGATCCAGTCAGGCACAGAGTTCGGCA 358 Query 18278 TCACGCTCGGC 18288 |||| || ||| Sbjct 357 TCACTCTGGGC 347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106981389614591