Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1755 125 1e-23 >seq1755 Length=4973 Score = 125 bits (138), Expect = 1e-23 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||||| || | ||| || || ||||||||||| || || ||||||| Sbjct 3087 TACCACCACGTAGACGCAACACCAGGTGGAGGGTGGATTCTTTCTGAATGTTGTAATCAG 3146 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | || || || || || || || || ||||| || | || || || |||| Sbjct 3147 AAAGAGTACGGCCATCCTCCAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCAGGAG 3206 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||||||||||||||| | || ||||| || || || || | || | Sbjct 3207 GAATACCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGA 3266 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | || || |||||||| || | |||||| || || |||||||| Sbjct 3267 CTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 3315 Score = 118 bits (130), Expect = 2e-21 Identities = 160/218 (73%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||||| || | ||| || || ||||||||||| || || |||||||| ||| | | || Sbjct 2872 ACGCAACACCAGGTGGAGGGTGGATTCTTTCTGAATGTTGTAATCAGAAAGAGTACGGCC 2931 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || || ||||||||||| || | || || || ||||| || || ||||| Sbjct 2932 ATCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTT 2991 Query 82715 ATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTT 82772 || || ||| ||||| || || || ||||| || || | || | || || || | || Sbjct 2992 GTCCTGGATC-TTGCTCTTGACGTTGTCAATGGTGTC-TGAGCTCTCAACCTCGAGCGTG 3049 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| || ||||| ||||| ||||| || ||||| Sbjct 3050 ATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 3087 Score = 87.8 bits (96), Expect = 4e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | ||| || ||||| || ||||| || || ||||| || || | | || Sbjct 3615 CGAAGGACGAGGTGGAGTGTAGACTCCTTCTGAATGTTGTAATCGGACAGGGTGCGGCCA 3674 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| || || || || |||||||| | | || || || ||||| || ||||||||| Sbjct 3675 TCTTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCTTCCTTA 3734 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || || ||||| | || || || || || ||||| | | || || || | || || Sbjct 3735 TCCTGGATCTTCGACTTGACGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATG 3794 Query 82776 GTCTTGCCTGT 82786 |||||||| || Sbjct 3795 GTCTTGCCAGT 3805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981803009311897