Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1755 93.3 1e-13 seq1258 91.5 3e-13 >seq1755 Length=4973 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || |||||||| || || || || || | ||||| || || ||||| |||| Sbjct 3300 AAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCCGACACTATCGATAAT 3241 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||||| || || || ||| || ||| || | || |||||| Sbjct 3240 GTGAAGTCCAAGATTCAAGATAAGGAGGGTATTCCTCCTGACCAGCAGCGTCTCATCTTC 3181 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||| ||||| | ||| | | ||||||||| | |||||||| || Sbjct 3180 GCAGGCAAGCAGCTGGAGGATGGCCGTACTCTTTCTGATTACAACATTCAGAAAGAATCC 3121 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || || ||||| || ||| | || || Sbjct 3120 ACCCTCCACCTGGTGTTGCGTCTACG 3095 >seq1258 Length=190882 Score = 91.5 bits (100), Expect = 3e-13 Identities = 167/245 (68%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166 || |||||||||| |||||||| ||||| ||| | || ||| | | |||| || | Sbjct 143853 GCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCGTAC 143912 Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226 || || | || || || | ||| | | | | || || | ||||| || | ||| Sbjct 143913 CAGAGCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCCTCCTGCTCGTACTTCGCGTAG 143972 Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286 || | ||||| || | ||||| | || | |||||||| || || || || || ||| Sbjct 143973 AGAGCATCGAACTCATCACCGTAGACATCAGCCAGACCGGGGGCCTCGTTGGGGCAGAAG 144032 Query 173287 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 173346 || |||| | || | || ||| || | |||||||||||| |||| ||||| | ||| Sbjct 144033 AGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGTGTCCACAAAGCG 144092 Query 173347 TAGAA 173351 ||||| Sbjct 144093 TAGAA 144097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181791681782083