Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1258 253 3e-62 seq1558 105 8e-18 >seq1258 Length=190882 Score = 253 bits (280), Expect = 3e-62 Identities = 579/863 (67%), Gaps = 15/863 (2%) Strand=Plus/Plus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 |||||||||| || |||| ||||| |||||| |||||| | ||||||| | Sbjct 143727 GGAAGGGCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTGTACTCGACG 143786 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | |||||| || ||| || |||| ||||| ||||||||||||||| Sbjct 143787 ATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTG 143846 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||||| |||||||||||||||||| |||| | || ||||| ||||| | | ||||| Sbjct 143847 TTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATG 143906 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTCCGCCTCGTA 111465 || | ||| | | || | | || | |||| || |||| || |||||| |||||| Sbjct 143907 GCGTACCAGAGCTTCTGAGCCTTG----ATGGTCTTGCGGCCACGGCCCTCCTGCTCGTA 143962 Query 111466 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 111525 ||| | |||||| || || ||||| ||||| | || | ||||| || |||| || Sbjct 143963 CTTCGCGTAGAGAGCATCGAACTCATCACCGTAGACATCAGCCAGACCGGGGGCCTCGTT 144022 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 || ||||| || | ||| | ||| ||||||| ||||||||||| || || || | Sbjct 144023 GGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGTGT 144082 Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 ||||| | | ||||| || | | ||| |||| || | ||| ||||| || | Sbjct 144083 CCACAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTACCGTGGTTCTTACGCAG 144142 Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC--- 111702 || |||||||| | || ||| |||||||| ||||| || |||| || | | || Sbjct 144143 ATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACCAGG 144202 Query 111703 -CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTG 111761 | | | | ||| | || | |||||||| || ||| |||||| || || ||||| | Sbjct 144203 GCGCTTGTTG-CCACCCTGGTCGACATAGCGTGCAGTGTTGTTAAACACACGCAGCATAG 144261 Query 111762 GAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACAT 111821 ||| |||||| | || || || || || | ||| ||| | || | | | Sbjct 144262 GAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATAC 144321 Query 111822 CATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 111881 |||| | || || ||||| ||||| ||| ||||| ||||| | | |||| Sbjct 144322 GGTGGACATTCAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAG 144381 Query 111882 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 111941 | | || ||||| | || ||| | | | | ||||||||| | | || Sbjct 144382 TATCGTAAATACCCTCAATGCTGTCAGCGCTCACATCAACCAGGAAGCAAGACGCAAGCT 144441 Query 111942 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGG 112000 | || || ||| | |||||||| ||||| || | ||||| |||| ||| | ||| Sbjct 144442 GGGGCTGGGGAGTAGCGGCATTGAAAAGGGTGGGGGAGGCGTGGGTGAA-GTACTTCTGG 144500 Query 112001 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCG 112060 |||||| || ||||||||| | | | ||||| || || |||||||| |||| || Sbjct 144501 GACATCAAGTGGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGGATTCCGACAGCA 144560 Query 112061 ACCCGCATGAACATGTACTGTGG 112083 || ||||| | || || ||| || Sbjct 144561 ACACGCATCAGCAAGTGCTGAGG 144583 >seq1558 Length=100248 Score = 105 bits (116), Expect = 8e-18 Identities = 299/458 (65%), Gaps = 20/458 (4%) Strand=Plus/Plus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| ||||| |||||||| |||||||||||||| ||| | ||| ||| ||||| Sbjct 40610 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCTAGGGAGATGGACTCCATG 40669 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCA--AATGGGTGGCACC-----CCAACTTGTTTGAG 122483 ||||| || || || | ||||| | | | || || ||| | || Sbjct 40670 AAGTCGAAGGGGTTGGTAGCGTTATAGTACTTCTTGTTGCCGAGGGCCACC-------AG 40722 Query 122484 GAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG 122543 ||||| || | || |||||||||||||| ||||| || |||||||| || | || Sbjct 40723 CAGACGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGAGTTCATGCCAAGCAG 40782 Query 122544 GTTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGAT 122603 ||| || || ||||| | |||| | | ||| || | || ||||| | ||| Sbjct 40783 ACCACAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGCCTCGACGATGAT 40842 Query 122604 GGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACG---GC 122660 || | | | | || ||| | | || | | | ||| | || || Sbjct 40843 AGCCTCAACCATCTTGGGGTCGGGGCGGTGGTTCA---TGTGGGAGAACAGCAGACAAGC 40899 Query 122661 AAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGG 122720 || || |||||||||||| || || || || || || || ||||| ||||| || Sbjct 40900 GAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGG 40959 Query 122721 CATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACC 122780 ||| ||||| |||||||||| ||| | || | | |||||| || |||||||||||||| Sbjct 40960 CATCAGACCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACC 41019 Query 122781 CTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 ||| ||| ||||| |||| || || ||||||| Sbjct 41020 CTCGACAGCGGCAAAGGCAACCAGACGCGAAGCGAAGG 41057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628016903680800