Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1258 228 1e-54 seq1558 138 1e-27 >seq1258 Length=190882 Score = 228 bits (252), Expect = 1e-54 Identities = 569/856 (66%), Gaps = 15/856 (2%) Strand=Plus/Plus Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 |||||||||| || ||||| || || |||| |||||| || ||||||| | Sbjct 143727 GGAAGGGCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTGTACTCGACG 143786 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 || || ||||||| ||| || || ||| || |||| |||||| || || ||| || Sbjct 143787 ATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTG 143846 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 || || ||||||||||| |||||| | || | || ||||| || |||| || ||||| Sbjct 143847 TTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATG 143906 Query 118884 GCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTT 118942 || | ||||| | || | || | | || | | | || ||||| | ||||||||| Sbjct 143907 GCGTACCAGAGCTTCTGAGCCTTG-ATGGTCTTGCGGCCACGGCCCTCCTGCTCGTACTT 143965 Query 118943 TGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGG 119002 | |||||| || || ||||| ||||| | | || | || || || |||| | || Sbjct 143966 CGCGTAGAGAGCATCGAACTCATCACCGTAGACATCAGCCAGACCGGGGGCCTCGTTGGG 144025 Query 119003 GCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 119062 ||||||||| | ||| | ||| ||||||| |||||||||||||| || || |||| Sbjct 144026 GCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGTGTCCA 144085 Query 119063 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 119122 | || ||||||| || ||| |||| | || || | || || || ||||| || Sbjct 144086 CAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTACCGTGGTTCTTACGCAGATC 144145 Query 119123 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 119182 | || || | || ||| ||||||||||| |||||||| | || | || || | | Sbjct 144146 GAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACC---AGG 144202 Query 119183 ACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGG 119236 || ||| |||||| ||||| | |||||| |||||| ||||| ||||| || Sbjct 144203 GCGCTTGTTGCCACCCTGGTCGACATAGCGTGCAGTGTTGTTAAACACACGCAGCATAGG 144262 Query 119237 AATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATC 119296 || ||||| | ||| ||| || || || | ||| ||| | || | | | Sbjct 144263 AACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATACG 144322 Query 119297 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 119356 ||||| | || ||| ||||| || || ||| ||||| || || | ||||| | Sbjct 144323 GTGGACATTCAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGT 144382 Query 119357 GCCGTAGATCCCATCGATCGAGTCA-CCCTTATTTGCGATGAGGAAGCAGCTCGACATTT 119415 |||| || || || || |||| | || | | | | |||||||| || | | Sbjct 144383 ATCGTAAATACCCTCAATGCTGTCAGCGCTCACAT-CAACCAGGAAGCAAGACGCAAGCT 144441 Query 119416 GAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGG 119474 | ||| ||| ||| | || ||||| || || || | |||||| |||| ||| | ||| Sbjct 144442 GGGGCTGGGGAGTAGCGGCATTGAAAAGGGTGGGGGAGGCGTGGGTGAA-GTACTTCTGG 144500 Query 119475 GACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAG 119534 |||||| || ||| ||||| | | | ||| || || ||||| || |||| | Sbjct 144501 GACATCAAGTGGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGGATTCCGACAGCA 144560 Query 119535 ACCCGCATAAACATGT 119550 || ||||| | || || Sbjct 144561 ACACGCATCAGCAAGT 144576 >seq1558 Length=100248 Score = 138 bits (152), Expect = 1e-27 Identities = 306/457 (67%), Gaps = 18/457 (4%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || || ||||||||||||||||| ||||| || | | | ||| |||||| Sbjct 40610 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCTAGGGAGATGGACTCCATG 40669 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACTCCAATCTGTTTGAGG 129841 || || || ||||| | | ||| | ||| || | | | | | || Sbjct 40670 AAGTCGAAGGGGTTGGTAGCGTTATAGTACTTCTTGTTGCCGAGGGCCACC------AGC 40723 Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901 ||||| || | |||| ||||||||||||| ||||| || ||||||||| || | || Sbjct 40724 AGACGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGAGTTCATGCCAAGCAGA 40783 Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961 ||| || || ||||| | |||| ||| ||| ||| | || || || | ||| Sbjct 40784 CCACAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGCCTCGACGATGATA 40843 Query 129962 GCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---GCA 130018 || | || ||| | | | || | | | || | | | ||| || || Sbjct 40844 GCCTCAACCATCTTGGGGTCGGGGCGGTGGTTCA---TGTGGGAGAACAGCAGACAAGCG 40900 Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078 || || |||||||||||||||||| ||||| || || || ||||| ||||| ||| Sbjct 40901 AAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGC 40960 Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138 || ||||| |||||||||| |||||| || | |||||||||||||||||||| ||| Sbjct 40961 ATCAGACCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCC 41020 Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 || ||| || || |||| |||||| ||| |||| Sbjct 41021 TCGACAGCGGCAAAGGCAACCAGACGCGAAGCGAAGG 41057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618420334363880