Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1755 122 5e-23 >seq1755 Length=4973 Score = 122 bits (134), Expect = 5e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||||||||| ||||| ||| || || |||||||| ||||| ||||| || || Sbjct 2870 AGACGCAACACCAGGTGGAGGGTGGATTCTTTCTGAATGTTGTAATCAGAAAGAGTACGG 2929 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || ||||| ||||| || | |||||| ||||| || || | |||||| Sbjct 2930 CCATCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCC 2989 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | || ||| | ||| |||||| |||||| || || | || Sbjct 2990 TTGTCCTGGATC-TTGCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCGAGCGT 3048 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| || || || ||||| || ||||| Sbjct 3049 GATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 3087 Score = 95.1 bits (104), Expect = 8e-15 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||||||||| ||||| ||| || || |||||||| ||||| ||||| || || Sbjct 3098 AGACGCAACACCAGGTGGAGGGTGGATTCTTTCTGAATGTTGTAATCAGAAAGAGTACGG 3157 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || || || || || | |||||| ||||| || || | |||||| Sbjct 3158 CCATCCTCCAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCAGGAGGAATACCCTCC 3217 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || ||| ||| || | || || || || ||||| ||| ||||| | || Sbjct 3218 TTATCT-TGAATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGACTTCAAGTGT 3276 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || | ||| ||||| ||||||||||| Sbjct 3277 AATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 3315 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| || |||||||||||| || || || ||||| || || | ||||||||||| Sbjct 3341 TGGAGCGTTGACTCCTTTTGAATATTGTAGTCGGAAAGAGTACGGCCATCTTCAAGTTGC 3400 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || |||||||| || || ||||| ||||| || || | |||||||| || |||||| Sbjct 3401 TTGCCGGCAAAGATCAAGCGCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATCTT 3459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314722223820059