Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1755 183 7e-41 seq1358 129 1e-24 seq1056 127 5e-24 seq1258 116 9e-21 >seq1755 Length=4973 Score = 183 bits (202), Expect = 7e-41 Identities = 166/209 (79%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || ||||| || ||||| ||||| || ||||| ||||| | ||| || | ||||| ||| Sbjct 2879 ACCAGGTGGAGGGTGGATTCTTTCTGAATGTTGTAATCAGAAAGAGTACGGCCATCCTCC 2938 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 |||||||| || || ||||| || || || ||||||||||| | || |||||||||||| Sbjct 2939 AGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGG 2998 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| || ||||| || |||||||| ||||| ||||||||||| ||||| |||||| Sbjct 2999 ATCTTGCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCGAGCGTGATAGTCTTT 3058 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || | |||||| ||||| | ||||| Sbjct 3059 CCGGTCAAAGTCTTGACAAAGATTTGCAT 3087 Score = 156 bits (172), Expect = 1e-32 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || ||||| || ||||| ||||| || ||||| ||||| | ||| || | ||||| ||| Sbjct 3107 ACCAGGTGGAGGGTGGATTCTTTCTGAATGTTGTAATCAGAAAGAGTACGGCCATCCTCC 3166 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 |||||||||||||||||||| || || || ||||||||||||| || ||||| || || Sbjct 3167 AGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCAGGAGGAATACCCTCCTTATCTTGA 3226 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| ||||| || ||||| ||||| || || || || || || || ||||| Sbjct 3227 ATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGACTTCAAGTGTAATAGTCTTG 3286 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| || || | |||||| Sbjct 3287 CCAGTGAGCGTCTTCACGAAAATCTGCAT 3315 Score = 145 bits (160), Expect = 2e-29 Identities = 146/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || ||||| || || ||||| ||||| | ||||| | |||||| Sbjct 3618 AGGACGAGGTGGAGTGTAGACTCCTTCTGAATGTTGTAATCGGACAGGGTGCGGCCATCT 3677 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| | ||| || ||||||||||| | |||||||| ||| Sbjct 3678 TCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCTTCCTTATCC 3737 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| || || | |||||||| || ||||| ||| Sbjct 3738 TGGATCTTCGACTTGACGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTC 3797 Query 211083 TTTCCCGTGA 211092 || || |||| Sbjct 3798 TTGCCAGTGA 3807 Score = 122 bits (134), Expect = 2e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || ||||| ||||| || || || || | ||| || | |||||| Sbjct 3332 AGGACGAGGTGGAGCGTTGACTCCTTTTGAATATTGTAGTCGGAAAGAGTACGGCCATCT 3391 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| || ||||| | ||| || ||||| || |||| || ||||| ||| Sbjct 3392 TCAAGTTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCGGGGGGAATGCCCTCCTTATCC 3451 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||| || || | || ||||| || ||||| || Sbjct 3452 TGGATCTTCGACTTAACATTGTCGATAGTATCGCTGGACTCGACCTCAAGGGTGATGGTT 3511 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 ||||| || || ||||| || Sbjct 3512 TTTCCAGTCAGGGTCTTGAC 3531 >seq1358 Length=111181 Score = 129 bits (142), Expect = 1e-24 Identities = 100/119 (84%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| || ||||| || |||||||| ||||||| ||| || | ||||| Sbjct 81635 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCC 81694 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||||||||| |||||||| ||||| |||||||||||||||| || |||||||| Sbjct 81695 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCAGGAGGAATACCCTCCTTGTC 81753 >seq1056 Length=49498 Score = 127 bits (140), Expect = 5e-24 Identities = 138/182 (76%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || ||||| | ||||| || |||||||| || |||||||| Sbjct 46213 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 46272 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || ||||||||||| |||| || ||||||||||||||||| || ||||| ||| Sbjct 46273 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 46332 Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 |||||||| ||| || || ||||| || || ||||| ||||| || ||||| || Sbjct 46333 ATGGTGTC---GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 46389 Query 211104 AA 211105 || Sbjct 46390 AA 46391 >seq1258 Length=190882 Score = 116 bits (128), Expect = 9e-21 Identities = 192/276 (70%), Gaps = 6/276 (2%) Strand=Plus/Plus Query 178093 GTTCTTTTGGTTGCTCTTTCTG---CAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149 |||||| ||||| ||||| || ||| ||||| ||||| |||||||| | || Sbjct 143825 GTTCTTCTGGTTACTCTTCTTGTTGCAA---GCATCCTTGTAGAGCATGAAGGGGTTACC 143881 Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209 ||||| || ||| | |||||| | ||| |||| ||| || || ||||| Sbjct 143882 AGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTCTTGCG 143941 Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269 | | || || | ||||||||| |||||| | ||||| || || |||||||| Sbjct 143942 GCCACGGCCCTCCTGCTCGTACTTCGCGTAGAGAGCATCGAACTCATCACCGTAGACATC 144001 Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329 | | |||||||| ||||| |||||||||||||| |||| | ||||| ||| || || Sbjct 144002 AGCCAGACCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACG 144061 Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 ||||||||||| || | ||||| | || ||||| Sbjct 144062 CTTCATGAAGAGATCGGGTGTCCACAAAGCGTAGAA 144097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159123440305895