Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1755 96.9 3e-15 >seq1755 Length=4973 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || ||||| ||| ||||| ||||| || |||| ||| || || | || ||||| || Sbjct 3341 TGGAGCGTTGACTCCTTTTGAATATTGTAGTCGGAAAGAGTACGGCCATCTTCAAGTTGC 3400 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| ||||| || | ||||||||||||| ||| | || ||| || ||| ||| ||| Sbjct 3401 TTGCCGGCAAAGATCAAGCGCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATCTTC 3460 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || | | | | |||||||| ||||| || || | ||||| ||||||| ||| Sbjct 3461 GACTTAACATTGTCGATAGTATCGCTGGACTCGACCTCAAGGGTGATGGTTTTTCCAGTC 3520 Query 39262 AGCGTTTTAAC 39272 || || || || Sbjct 3521 AGGGTCTTGAC 3531 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116 ||| || | || || ||||||| || || ||| ||||| || || || ||||| | Sbjct 2860 GCCACCACGTAGACGCAACACCAGGTGGAGGGTGGATTCTTTCTGAATGTTGTAATCAGA 2919 Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGG 39176 ||| || || | || || ||||| || || ||||| || |||||||||||||| | || Sbjct 2920 AAGAGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGAGG 2979 Query 39177 CACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACT 39232 | | ||| |||||| ||| || |||| ||| | | | || || ||| || Sbjct 2980 GATACCCTCCTTGTCCTGGATCTTGCTCTTGA-CGTTGTCAATGGTGTCTGAGCT---CT 3035 Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || | ||||||| | ||||| |||| || || |||||||||||||| Sbjct 3036 CAACCTCGAGCGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 3087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429535532927699