Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1755 152 1e-31 seq1056 98.7 2e-15 seq1457 93.3 1e-13 >seq1755 Length=4973 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || || |||||||| ||||||||||| || | |||||||| | | ||| Sbjct 2866 ACGTAGACGCAACACCAGGTGGAGGGTGGATTCTTTCTGAATGTTGTAATCAGAAAGAGT 2925 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| ||||| ||||| || || || ||||| || || ||||| Sbjct 2926 ACGGCCATCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACC 2985 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || || |||||||||||| | || || || | Sbjct 2986 CTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCGAG 3045 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| ||||| || |||||||| || | || | |||||| Sbjct 3046 CGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 3087 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || || |||||||| ||||||||||| || | |||||||| | | ||| Sbjct 3094 ACGTAGACGCAACACCAGGTGGAGGGTGGATTCTTTCTGAATGTTGTAATCAGAAAGAGT 3153 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || || ||||| || |||||||| Sbjct 3154 ACGGCCATCCTCCAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCAGGAGGAATACC 3213 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| ||||| ||||| ||||||| ||||| ||||| || | || || || | Sbjct 3214 CTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGACTTCAAG 3273 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||| || | || || | ||| | ||||| Sbjct 3274 TGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 3315 >seq1056 Length=49498 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| || |||||||| Sbjct 46213 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 46272 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || |||||||| || ||||| || |||||||| |||||||| ||| || ||| Sbjct 46273 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 46332 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || || || | || || ||||| ||||||| || || | ||| Sbjct 46333 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 46391 >seq1457 Length=12202 Score = 93.3 bits (102), Expect = 1e-13 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 7566 TATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGG 7625 ||| || || |||||||| | | ||||||||||| | |||||||| | | || || Sbjct 4519 TATAATAACAGCGCATGCTATCTTGATGATTTTCTTCATGGTTATGCCTGCATTAATTGG 4460 Query 7626 CGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAG 7685 ||||| || |||| || | || ||| | |||| | ||| |||||||| ||||| || Sbjct 4459 AGGTTTTGGTAATTTCTTATTACCATTACTAGTTGGAGGTCCAGATATGGCATTTCCTAG 4400 Query 7686 GCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 | || |||||||||||||||||| || ||| |||||| || Sbjct 4399 ATTAAATAATATAAGTTTTTGATTATTAGTTCCTAGTTTATTTTTA 4354 Score = 91.5 bits (100), Expect = 4e-13 Identities = 82/101 (81%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTG--ATAAAGGATAGGATCGCCTCCGCCT 370729 ||||||||| ||||| ||||||||||||||||| ||||| |||||||| || || || Sbjct 3961 TTCAGGATGTCCAAAGAATCAGAATAAATGTTGGAATAAA--ATAGGATCACCACCACCA 4018 Query 370730 GATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 | | ||||||||| ||||| || |||||||||||||| Sbjct 4019 GCTACTTCAAAAAAGGATGTATTGAAGTTTCTATCAGTTAA 4059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192501817894562