Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1755 167 6e-36 seq1056 114 3e-20 seq1258 89.7 1e-12 seq1358 87.8 4e-12 >seq1755 Length=4973 Score = 167 bits (184), Expect = 6e-36 Identities = 163/210 (78%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||| | || ||||| || ||||| |||||||| || ||||||||| Sbjct 3084 CAAATCTTTGTCAAGACTTTGACCGGAAAGACTATCACGCTCGAGGTTGAGAGCTCAGAC 3025 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || || |||||||| |||||||| Sbjct 3024 ACCATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAG 2965 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || ||||| || ||||| | |||||| | ||||| ||| | Sbjct 2964 CGTCTCATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCTGATTACAACATT 2905 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || |||||||| || || || || || ||| Sbjct 2904 CAGAAAGAATCCACCCTCCACCTGGTGTTG 2875 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || ||||| || || || || || || || || || || ||| Sbjct 3312 CAGATTTTCGTGAAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCCGAC 3253 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || |||||||| || || || || || ||||| |||||||| Sbjct 3252 ACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGTATTCCTCCTGACCAGCAG 3193 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| || ||||| | |||||| | ||||| ||| | Sbjct 3192 CGTCTCATCTTCGCAGGCAAGCAGCTGGAGGATGGCCGTACTCTTTCTGATTACAACATT 3133 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || |||||||| || || || || || ||| Sbjct 3132 CAGAAAGAATCCACCCTCCACCTGGTGTTG 3103 >seq1056 Length=49498 Score = 114 bits (126), Expect = 3e-20 Identities = 136/183 (74%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 46392 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGC---GACAC 46336 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || || || || ||||| || || Sbjct 46335 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCG 46276 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || |||||||||||||| |||||||| ||||| | || || ||| || ||| |||| Sbjct 46275 TCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 46216 Query 178106 AAA 178108 || Sbjct 46215 GAA 46213 >seq1258 Length=190882 Score = 89.7 bits (98), Expect = 1e-12 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 214202 CAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACCTTTTTGGCTCTTCCCTCGTTTT 214261 |||||||| | |||||| | || ||||| | | ||| | | | ||||| | | Sbjct 143899 CAAGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCCTCCTGCT 143958 Query 214262 CGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATCATCAAGACCGGGAGCCT 214321 ||||||| | || |||| || || || ||||||||||||| | |||||||| |||| Sbjct 143959 CGTACTTCGCGTAGAGAGCATCGAACTCATCACCGTAGACATCAGCCAGACCGGGGGCCT 144018 Query 214322 CGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCTTTTCATGAAAAGGTCGG 214381 ||||||||||||| || |||| | || || || || | |||||||| || |||| Sbjct 144019 CGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGG 144078 Query 214382 AAGTCCA 214388 ||||| Sbjct 144079 GTGTCCA 144085 >seq1358 Length=111181 Score = 87.8 bits (96), Expect = 4e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| || || || ||||| ||||| || || || ||||||||||| || |||||||| Sbjct 81753 GACAAGGAGGGTATTCCTCCTGACCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 81694 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||||| | |||||| | ||||| ||| |||| || || || || || || || || Sbjct 81693 GATGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 81638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203701541944062