Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001561935.1_202016-02- 16] 92 sequences; 29,140,916 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq2 116 4e-21 seq73 104 3e-17 >seq2 Length=1012446 Score = 116 bits (128), Expect = 4e-21 Identities = 719/1144 (63%), Gaps = 20/1144 (2%) Strand=Plus/Plus Query 53711 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 53770 || ||||| || || || || ||||||| || | | || | | ||||| |||||| Sbjct 663317 GAAGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACTGTACTCGACGATCTCGGTGCAA 663376 Query 53771 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 53830 || || | || || || | || | || |||||||| ||||| || |||||| Sbjct 663377 AGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCC 663436 Query 53831 TTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACG 53890 ||||| || ||||| || ||||||| ||| |||||| || | ||| || | ||||| Sbjct 663437 TTATAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCATACCAGAGC 663496 Query 53891 ACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT--TCGTA--TAGTGTATACAA 53946 ||||||| || | || | | ||| | ||||| | ||| | | Sbjct 663497 TTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCCTGCTCGTACTTCACGTAAAGAG 663554 Query 53947 TCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAA 54006 ||| | ||||| || || |||||| ||| || || || | || || | | Sbjct 663555 -CGT-CGAACTCATCACCGTAAACATCAGCCAGGCCGGGGGCCTCGTTGGGGCAGAAGAG 663612 Query 54007 CGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 54066 | ||| || |||| ||| || || ||||| |||||||| ||| |||| | ||| Sbjct 663613 GGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGAGTCCACAAAGCGTA 663672 Query 54067 AAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGC 54126 || || || | || | | ||||| || || ||||| |||||||||||| | Sbjct 663673 GAAGAGGTCACGGGCGCGAACCTCCTCCTTACCGTGGTTCTTGCGCAGATCGAGGAACTC 663732 Query 54127 CATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCC 54186 | | ||| | ||||| || |||| ||| || | | | ||||| || ||||| || Sbjct 663733 GAAGACATCGGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCAGGGCGCTTGTTACC 663792 Query 54187 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 54246 || || || | || | ||||||||||| | || | || ||| |||| |||||| || Sbjct 663793 ACCTTGGTCCACATAGCGTGCGGTGTTATTGAACACGCGCAGCATAGGAACAATACCGTT 663852 Query 54247 GGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGAT 54304 ||| | || ||||| || || || || | || ||||| | ||| Sbjct 663853 GGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATT--C 663910 Query 54305 AGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 54364 | ||| || || || || | || ||||| | || || || | ||||| ||||| Sbjct 663911 AAACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATA 663970 Query 54365 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGGTGACGA 54421 ||||| || || || | ||| || || || | ||| |||| | || | | Sbjct 663971 CCCTCAATGCTGTCCGCGCTCACGTCAACCAGGA---AGCAAGACGCAAGCTGAGGTTGG 664027 Query 54422 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 54481 ||| | ||||| || | || || || ||||| || || | || | || | | Sbjct 664028 GGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGAACTTCTGGGACATCAAG 664087 Query 54482 TTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 54541 | ||| ||||| || || || |||||| |||||||| || || |||||||| Sbjct 664088 TGGTATGTCTCAATGGCCTTTTCAATATCCTCGCCGTGAATTCCGACAGCAACACGCATC 664147 Query 54542 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCC 54601 | || ||||||||| | ||| | | ||| ||| || || | ||| || || Sbjct 664148 AGCAAGTGCTGAGGACGCTCAGCAACGTTGCCGTTAATCCGAAGAAGGTATGAACGCTCG 664207 Query 54602 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTG 54661 | ||| || || || || ||||||| ||||| || ||||| | ||| | |||||| Sbjct 664208 AGAGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGAGTTG 664267 Query 54662 AGTTTATCCTTATATTTGTTAACTACATCCATGGTAATAC-TTGAAATAATCGGAGAATG 54720 || | || || || |||| | | | | || | | |||| || || |||| | | Sbjct 664268 AGCTCTTCGGCATGCTTCATAACGATCT-CGTAGTGTTCCTTTGAGATCATAGGAGCAGG 664326 Query 54721 TTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGttt 54780 || || || || || ||||||| | | || || || ||| | || Sbjct 664327 CTTATTGTTCTTGGGGTTCACATAGTGGTAGAGGTCGGAAATGACCATGGAGAATTGCTT 664386 Query 54781 ttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGG 54840 ||| |||| ||||| ||||| || ||||| || | || || ||||||||||| || || Sbjct 664387 TTTGGTTTGCTTGTGGAGATTCGAAACGGCGATACGTGCAGCCAGAATGGCATAGTCGGG 664446 Query 54841 ATGT 54844 ||| Sbjct 664447 GTGT 664450 >seq73 Length=6463649 Score = 104 bits (114), Expect = 3e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 || ||||| || ||| ||||||||||| | | || | |||||||| || ||||| Sbjct 574140 CAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGA 574199 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 |||||||| | ||||||||| || ||||| || ||||| || ||||| || || ||||| Sbjct 574200 CCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAG 574259 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAA 24279 || || || || || || ||||||| Sbjct 574260 ATACCCTCAACAGCGGCGAAGGCAA 574284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720917220160