Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001561935.1_202016-02- 16] 92 sequences; 29,140,916 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq73 100 2e-16 seq72 98.7 9e-16 >seq73 Length=6463649 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || |||||| || | || ||| || || |||||||| || | ||| || ||| Sbjct 2153219 CAGCACCAAATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCATC 2153278 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||| || |||||| |||| ||||||||||| || || || || |||||||| || Sbjct 2153279 CTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATTCCCTCCTTATC 2153338 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | ||| || ||| || | |||| ||||| | ||||| ||||| | || | || Sbjct 2153339 TTGAATCTTGCTTTTCACGTTGTCGATAGTGTCTGAACTCTCAACCTCCAGTGTGATAGT 2153398 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || |||| || || ||||| || ||||| Sbjct 2153399 CTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 2153431 Score = 93.3 bits (102), Expect = 4e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || ||||||||||| | |||||| |||||||||||| || ||| Sbjct 4900246 GTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCA 4900187 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 ||| |||| || |||||||| || || || || ||||||||||||| Sbjct 4900186 GCGAAGATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCTG 4900141 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||| | ||| || || || || ||||| ||||| | ||||| ||| || || || Sbjct 2153456 GTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTG 2153515 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| ||||||| |||||||| ||||| || || ||||||||||| ||||| Sbjct 2153516 CTTGCCTGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATTTT 2153575 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| || || || ||| ||||| | ||| | || ||||| || Sbjct 2153576 GGACTTTACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGT 2153635 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || |||||||| Sbjct 2153636 AAGGGTCTTGACGAAGATCTGCAT 2153659 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||| | ||| || || || || ||||| ||||| | ||||| ||| || || || Sbjct 2153684 GTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTG 2153743 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| ||||||| |||||||| || || || || ||||||||||| ||||| Sbjct 2153744 CTTGCCTGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATTTT 2153803 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| || || || ||| ||||| | ||| | || |||||||| Sbjct 2153804 GGACTTTACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCGGT 2153863 Query 118715 CAGAGTTTTTAC 118726 ||| || ||||| Sbjct 2153864 CAGGGTCTTTAC 2153875 >seq72 Length=3214209 Score = 98.7 bits (108), Expect = 9e-16 Identities = 133/182 (73%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||||||| ||||| |||||||||||| || || ||| |||| Sbjct 2114461 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 2114402 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTT 118668 || |||||||| || || || || |||||||| | ||| | | || || || || | | Sbjct 2114401 AGGCGCTGCTGGTCAGGGGGAATACCCTCCTTATCCTGGA--TCTTGGTCTTGACATTGT 2114344 Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728 ||| |||||| | |||||| |||| ||| | || || || ||||| || || || | Sbjct 2114343 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 2114284 Query 118729 AA 118730 || Sbjct 2114283 AA 2114282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829913567664