Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001561935.1_202016-02-
16] 92 sequences; 29,140,916 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq73 111 2e-19
seq72 87.8 2e-12
>seq73
Length=6463649
Score = 111 bits (122), Expect = 2e-19
Identities = 159/220 (72%), Gaps = 8/220 (4%)
Strand=Plus/Plus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||||| ||||||||||| ||||||||||| || || ||||| || | ||||| || |
Sbjct 2153216 ACGCAGCACCAAATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCC 2153275
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || ||||||||||||||||| || || ||||||||||| | || | | ||||||
Sbjct 2153276 ATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATTCCCTCCTT 2153335
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 43143
| | ||| | || ||| ||| | | | ||||| ||| || || || | |
Sbjct 2153336 AT-CTTGAATCTTGCTTTTCACGTTGTCGATAGTGTCTGAACTC---TCAACCTCCAGTG 2153391
Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||| || || || || | ||||| ||||||||||||||
Sbjct 2153392 TGATAGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 2153431
Score = 96.9 bits (106), Expect = 4e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| || || || ||||| | || || || | || || || ||||| || |||||
Sbjct 2153469 TCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAG 2153528
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
||||| ||||||||||||| || | | |||||||||| |||||| || | |
Sbjct 2153529 ATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTG 2153588
Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | || ||||| || || || || | |||||||| ||||| || || ||||| ||
Sbjct 2153589 TCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACG 2153648
Query 43173 AAGATTTGCAT 43183
||||| |||||
Sbjct 2153649 AAGATCTGCAT 2153659
Score = 84.2 bits (92), Expect = 3e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| || || || ||||| | || || || | || || || ||||| || |||||
Sbjct 2153697 TCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAG 2153756
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
||||| ||||||||||| | || | | |||||||||| |||||| || | |
Sbjct 2153757 ATGAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTG 2153816
Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | || ||||| || || || || | |||||||| ||||| || || ||||||||
Sbjct 2153817 TCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTTAC 2153875
>seq72
Length=3214209
Score = 87.8 bits (96), Expect = 2e-12
Identities = 128/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| || || ||||| || ||| || || | || || |||||||| || ||||| |
Sbjct 2114463 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 2114404
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
| || ||||||||||| | || | | |||||| ||| ||| || |||| |
Sbjct 2114403 TCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTATCCTGGATCTTGGTCTTGACATTGT 2114344
Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173
| | ||||||||||| || ||||||| || ||||| || ||||| || ||||| || |
Sbjct 2114343 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 2114284
Query 43174 A 43174
|
Sbjct 2114283 A 2114283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571816942409760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |