Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001561935.1_202016-02- 16] 92 sequences; 29,140,916 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq73 111 1e-19 >seq73 Length=6463649 Score = 111 bits (122), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| ||||| || || || || ||| | || || | |||||||||||||| Sbjct 2153468 TTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAA 2153527 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGA 34315 ||||| |||||||||||| ||| | | ||||||||| || ||||| ||||| | Sbjct 2153528 GATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTC--CTGGATTTTGGACTTTACA 2153585 Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375 | | | || | |||| | || || || || | |||||||| ||||| || || || || Sbjct 2153586 TTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTG 2153645 Query 34376 ACAAAGATCTGCAT 34389 || ||||||||||| Sbjct 2153646 ACGAAGATCTGCAT 2153659 Score = 96.9 bits (106), Expect = 2e-15 Identities = 128/173 (74%), Gaps = 6/173 (3%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGA 34256 ||| ||||| ||||| ||||| |||| | || || | || || | ||||||||||||| Sbjct 2153978 TTCCTTCTGGATGTTATAGTCCGACAAGGTG-CGACCATCTTCAAGTTGCTTGCCTGCGA 2154036 Query 34257 AAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAG 34314 | ||||| |||||||||||| ||| | | ||||||||| || ||||| ||||| Sbjct 2154037 AGATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTC--CTGGATTTTGGACTTTAC 2154094 Query 34315 ATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGA 34367 || | | || | |||| | || || || || | |||||||| ||||| |||| Sbjct 2154095 ATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTGA 2154147 Score = 93.3 bits (102), Expect = 3e-14 Identities = 131/182 (72%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| ||||| || || || || ||| | || || | |||||||||||||| Sbjct 2153696 TTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAA 2153755 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGA 34315 ||||| ||||||||||| ||| | | ||||||||| || ||||| ||||| | Sbjct 2153756 GATGAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC--CTGGATTTTGGACTTTACA 2153813 Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375 | | | || | |||| | || || || || | |||||||| |||||||| || || || Sbjct 2153814 TTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTT 2153873 Query 34376 AC 34377 || Sbjct 2153874 AC 2153875 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | |||||||| || | || || || ||||| ||||||||||| || Sbjct 2153205 CCACCACGCAGACGCAGCACCAAATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 2153264 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| |||||| || ||||| || || ||||||||||| ||| Sbjct 2153265 AGAGTACGTCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGA 2153324 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT--AGATCGGCTATCGAATCGGTCGATTCGA 34340 | | |||||| || ||| ||||||| | | | | || | || | || | Sbjct 2153325 ATTCCCTCCTTATCTTGAATC--TTGCTTTTCACGTTGTCGATAGTGTCTGAACTCTCAA 2153382 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| ||||| || || || || | || || |||||||| ||||| Sbjct 2153383 CCTCCAGTGTGATAGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 2153431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071637755520