Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001561935.1_202016-02- 16] 92 sequences; 29,140,916 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq2 138 1e-27 seq73 113 6e-20 >seq2 Length=1012446 Score = 138 bits (152), Expect = 1e-27 Identities = 726/1145 (63%), Gaps = 22/1145 (2%) Strand=Plus/Plus Query 62949 GATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 63008 || ||||| || || || || ||||||| || | | || | | ||||| |||||| Sbjct 663317 GAAGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACTGTACTCGACGATCTCGGTGCAA 663376 Query 63009 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63068 || || | ||||| || | || | || |||||||| ||||| || |||||| Sbjct 663377 AGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCC 663436 Query 63069 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63128 ||||| || ||||| || ||||||| ||| |||| | || | ||| || | ||||| | Sbjct 663437 TTATAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCATACCAGA-G 663495 Query 63129 ACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT--TCGTA--TAGAGTATACA 63183 || ||||||| || | || | | ||| | ||||| | ||| | | Sbjct 663496 CTTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCCTGCTCGTACTTCACGTAAAGA 663553 Query 63184 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCA 63243 ||| ||||||| || || |||||| ||| | || || | || || | | Sbjct 663554 G-CGT-CGAACTCATCACCGTAAACATCAGCCAGGCCGGGGGCCTCGTTGGGGCAGAAGA 663611 Query 63244 ACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 63303 | ||| || |||| ||| || || ||||| |||||||| ||| |||| | ||| Sbjct 663612 GGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGAGTCCACAAAGCGT 663671 Query 63304 TAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 63363 || || || | | | | ||||| || || ||||| |||||||||||| Sbjct 663672 AGAAGAGGTCACGGGCGCGAACCTCCTCCTTACCGTGGTTCTTGCGCAGATCGAGGAACT 663731 Query 63364 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTC 63423 | | | ||| | ||||| || |||| ||| || || | | ||||| || ||||| | Sbjct 663732 CGAAGACATCGGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCAGGGCGCTTGTTAC 663791 Query 63424 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGT 63483 | || || || | || | ||||||||||| | || | || ||| |||| |||||||| Sbjct 663792 CACCTTGGTCCACATAGCGTGCGGTGTTATTGAACACGCGCAGCATAGGAACAATACCGT 663851 Query 63484 TTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGA 63541 | || || ||||| || || || || | || ||||| | ||| Sbjct 663852 TGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATT-- 663909 Query 63542 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63601 | ||| || || || || | || ||||| | || || || | || || ||||| Sbjct 663910 CAAACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGAT 663969 Query 63602 GCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGGTGACG 63658 || || ||||| || || ||| || || || | ||| |||| | || | | Sbjct 663970 ACCCTCAATGCTGTCCGCGCTCACGTCAACCAGGA---AGCAAGACGCAAGCTGAGGTTG 664026 Query 63659 AGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAG 63718 | ||| | ||||| || | || || || ||||| || || | || | || | | Sbjct 664027 GGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGAACTTCTGGGACATCAA 664086 Query 63719 ATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCAT 63778 | ||| |||||||| || || |||||| |||||||| || || |||||||| Sbjct 664087 GTGGTATGTCTCAATGGCCTTTTCAATATCCTCGCCGTGAATTCCGACAGCAACACGCAT 664146 Query 63779 TAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63838 | || ||||||||| | ||| ||| ||| ||| || | | ||| || || Sbjct 664147 CAGCAAGTGCTGAGGACGCTCAGCAACGTTGCCGTTAATCCGAAGAAGGTATGAACGCTC 664206 Query 63839 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATT 63898 | ||| || || || || ||||||| ||||| || ||||| | ||| |||| || Sbjct 664207 GAGAGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGAGTT 664266 Query 63899 GAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATAC-TTGAAATAATCGGAGAAT 63957 ||||| || || || |||| || | | | || | | |||| || || |||| | Sbjct 664267 GAGCTCTTCGGCATGCTTCATAACGATCT-CGTAGTGTTCCTTTGAGATCATAGGAGCAG 664325 Query 63958 GTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 64017 | || || || || || ||||||| | | | || || || ||| | | Sbjct 664326 GCTTATTGTTCTTGGGGTTCACATAGTGGTAGAGGTCGGAAATGACCATGGAGAATTGCT 664385 Query 64018 tttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCG 64077 |||| |||| |||||| ||||| || | ||| || | || || ||||||||||| || | Sbjct 664386 TTTTGGTTTGCTTGTGGAGATTCGAAACGGCGATACGTGCAGCCAGAATGGCATAGTCGG 664445 Query 64078 GATGT 64082 | ||| Sbjct 664446 GGTGT 664450 >seq73 Length=6463649 Score = 113 bits (124), Expect = 6e-20 Identities = 112/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || ||||| || ||| ||||||||||| | | || | ||||| || || ||||| Sbjct 574140 CAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGA 574199 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| | ||||||||| || ||||| || ||||| |||||||| ||||| |||||| Sbjct 574200 CCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAG 574259 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAA 33726 || || || || || || ||||||| Sbjct 574260 ATACCCTCAACAGCGGCGAAGGCAA 574284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816875709760