Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001561935.1_202016-02- 16] 92 sequences; 29,140,916 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq2 129 8e-25 >seq2 Length=1012446 Score = 129 bits (142), Expect = 8e-25 Identities = 667/1051 (63%), Gaps = 20/1051 (2%) Strand=Plus/Plus Query 71797 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATC 71856 || |||||||| ||||| || ||||||||||| || || || || ||||||| ||| || Sbjct 663410 TGGTTACTCTTCTTGTTGCAAGCATCCTTATAGAGCATGAAGGGGTTACCAGTCTCAGTC 663469 Query 71857 TGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTT 71915 || | || | ||| || | ||||| | || ||||||| || | || | | | Sbjct 663470 TGGGCCTCGAGAATGGCATACCAGA-GCTTCTGAGCCTTGATGGTCTTGCGGC--CACGG 663526 Query 71916 TTCTCTT--TCGTATTGTGTATATA-ATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAA 71972 ||| | ||||| | || | | ||| ||||||| || || || ||| | | Sbjct 663527 CCCTCCTGCTCGTACTTCACGTAAAGAGCGT-CGAACTCATCACCGTAAACATCAGCCAG 663585 Query 71973 TCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCAT 72032 || || || || || || | | | ||| || || | | | || || ||||| Sbjct 663586 GCCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCAT 663645 Query 72033 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCC 72092 |||||||| ||| |||| | ||| || || || | || | | |||||| || || Sbjct 663646 GAAGAGATCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCGCGAACCTCCTCCTTACC 663705 Query 72093 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 72152 ||||| |||||||||||| | | | ||| | ||||| || |||| ||| || Sbjct 663706 GTGGTTCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCATGGCTCCAGGTAGAT 663765 Query 72153 GGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 72212 || | | || || || ||||| || || || || | || | ||||||||||| | Sbjct 663766 AGCAAAGGCACCAGGGCGCTTGTTACCACCTTGGTCCACATAGCGTGCGGTGTTATTGAA 663825 Query 72213 AACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCC 72272 || | || ||| |||| |||||| ||||| | || ||||| || || || || Sbjct 663826 CACGCGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACC 663885 Query 72273 ACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 72330 | || ||||| || ||| | ||| || || || || | || ||||| | Sbjct 663886 GGTAGCGCGAATGCGGTGGACATT--CAAACCGATACCACCAGCGGTCTTGGAGATCATG 663943 Query 72331 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 72390 || || || | ||||| ||||| ||||| || || || | ||| || || || Sbjct 663944 GCACAGGTCTTGAGAGTATCGTAGATACCCTCAATGCTGTCCGCGCTCACGTCAACCAGG 664003 Query 72391 AAACAGCTAGAC---ATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 72447 | ||| |||| | || | | ||| | ||||| || | || || || ||| Sbjct 664004 A---AGCAAGACGCAAGCTGAGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCG 664060 Query 72448 TGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCAT 72507 || || || | || | |||| | | ||| |||||||| || ||| |||||| Sbjct 664061 TGAGTGAAGAACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTTTCAATATCCTCG 664120 Query 72508 TGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTA 72567 || ||||| || || |||||||| | || |||||||| | ||| | | ||| Sbjct 664121 CCGTGAATTCCGACAGCAACACGCATCAGCAAGTGCTGAGGACGCTCAGCAACGTTGCCG 664180 Query 72568 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 72627 || || | | ||| || || | ||| || || || || ||||||| ||| Sbjct 664181 TTAATCCGAAGAAGGTATGAACGCTCGAGAGTCTTGAATCCGAAGAAGTTGTAGTTGAAG 664240 Query 72628 TCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATG 72687 || || ||||| | ||| |||| ||||| | || || || |||| || | | | Sbjct 664241 TCACGGTCGTACACAATGGCCGAGTTGAGCTCTTCGGCATGCTTCATAACGATCT-CGTA 664299 Query 72688 GTGATAC-TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAA 72746 ||| | | |||| || || |||| | | || || || || || ||||||| | | | Sbjct 664300 GTGTTCCTTTGAGATCATAGGAGCAGGCTTATTGTTCTTGGGGTTCACATAGTGGTAGAG 664359 Query 72747 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTAT 72806 || || || ||| | ||||| |||| |||||| ||||| || ||||| || Sbjct 664360 GTCGGAAATGACCATGGAGAATTGCTTTTTGGTTTGCTTGTGGAGATTCGAAACGGCGAT 664419 Query 72807 TCTGGCGGCTAGAATGGCATAATCTGGATGT 72837 | || || ||||||||||| || || ||| Sbjct 664420 ACGTGCAGCCAGAATGGCATAGTCGGGGTGT 664450 Score = 86.0 bits (94), Expect = 8e-12 Identities = 186/278 (67%), Gaps = 3/278 (1%) Strand=Plus/Plus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 || ||||| ||||| | || ||||| | ||||| || ||||||||||| || || ||| Sbjct 662405 GTGAACTGGATGGGGGCAGAAGCGGCCATGGTACGGAGGTAGTACATGCCGGTCTTCAGA 662464 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATG 70920 || | |||| ||| || ||||| || || || ||| | |||| || | | Sbjct 662465 CCCATCTTCCAGCCGGCGAAGTGCATGCTGGTGAGCTTGCCCATGGTAGGCTCCTTCAAG 662524 Query 70921 TGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 70980 || || || | ||||| |||||||||||||| || | ||| || ||||| | | Sbjct 662525 TGGATGTTGAGGGACTGCGACTGATCGATGAAGGCACCACGGTCGGCGGCCATCTGGAGA 662584 Query 70981 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 71040 || | || | || ||||| | || || || | ||| ||||| | || | | Sbjct 662585 ATGTTGCGCTGGGAGATCTCCCAGACGGTCTTGTACAGGGCCTTGATATCCGCGGGGATG 662644 Query 71041 TTTG---TATTCTGAATGGATCCACCATCTGCAATAAT 71075 || | ||||||||| ||| |||||||| ||||| || Sbjct 662645 TTGGGGATATTCTGAACGGAACCACCATCGGCAATGAT 662682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138428189920