Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001561935.1_202016-02- 16] 92 sequences; 29,140,916 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq73 147 3e-30 seq2 102 1e-16 >seq73 Length=6463649 Score = 147 bits (162), Expect = 3e-30 Identities = 334/497 (67%), Gaps = 23/497 (5%) Strand=Plus/Minus Query 125366 TAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAG 125425 ||| ||||| | |||| | || |||||| | ||| | |||| | | ||| | Sbjct 574349 TAAGAAGGCCAACTGGGCCCTCCGCTGGATCAACGACCGCGAGTCAACCTTCGCTTCGCG 574290 Query 125426 ACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTT 125485 ||||| || |||||||| || ||||| |||||||| || || || || ||||||| Sbjct 574289 TCTGGTTGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGCTCATTCGCCTCCATCTT 574230 Query 125486 TTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCG 125545 ||||| |||||||| || | |||||||| || || | |||||| | || ||||| Sbjct 574229 CTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTCACTTTCTCCAACGAGCTCATCTCTCG 574170 Query 125546 AGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTGCGTCC 125602 |||||||| || ||| |||||| || || || || || || | | | || || Sbjct 574169 TGACGAGGGTCTCCACACTGACTTCGCTTGCCTGCTCTTCTCCCACATGAACCACCGCCC 574110 Query 125603 CGAGTGCA-GATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAG 125661 ||| || |||| | ||| ||||| |||| ||| ||||| | || | Sbjct 574109 CGACCCCAAGATCGTTC-------AGGACATCA---TTGT---CGAGGCCGTCGGCATCG 574063 Query 125662 AACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAA 125721 | || ||||| || || || | || || | | | |||||||||||| |||||| | Sbjct 574062 AGCAGGAGTTCCTGACTGACGCTCTTCCCTGCGGTCTTCTTGGCATGAACTCCAAGCTGA 574003 Query 125722 TGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA 125781 ||||||||||||| ||||| || || || || || ||| | | | ||| ||||| Sbjct 574002 TGTGCGAGTACATTGAGTTCGTCGCTGACCGCCTGCTG---GTGGCCCTCGGCAACAAGA 573946 Query 125782 ---TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGA 125838 |||||||| | || ||||| || |||||| ||| || || | || |||| Sbjct 573945 AGTACTACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGA 573886 Query 125839 CCAACTTTTTCGAGAAG 125855 ||||||| ||||||||| Sbjct 573885 CCAACTTCTTCGAGAAG 573869 >seq2 Length=1012446 Score = 102 bits (112), Expect = 1e-16 Identities = 333/511 (65%), Gaps = 10/511 (2%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 || || || || || || || || || | || ||||| |||| || |||||||| || Sbjct 663798 CAAGGTGGTAACAAGCGCCCTGGTGCCTTTGCTATCTACCTGGAGCCATGGCACGCCGAT 663739 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || |||| ||||||| ||| || || |||| || ||| | ||| Sbjct 663738 GTCTTCGAGTTCCTCGATCTGCGCAAGAACCACGGTAAGGAGGAGGTTCGCGCCCGTGAC 663679 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA---CGACGGTGGC 97052 | || || || | ||| || ||| | ||||||||||| || | | |||||| Sbjct 663678 CTCTTCTACGCTTTGTGGACTCCCGATCTCTTCATGAAGCGTGTTGAGGCCAACGGTG-- 663621 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||||| ||| | |||||| || | | ||||| ||| | ||| | || || ||| Sbjct 663620 -ACTGGACCCTCTTCTGCCCCAACGAGGCCCCCGGCCTGGCTGATGTTTACGGTGATGAG 663562 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGC 97171 || || || ||| | |||||||| |||||||| || |||| | || | || Sbjct 663561 TTCGACGCTCTTTACGTGAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACCA-TCAAGGC 663503 Query 97172 ACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | |||| || ||| | ||||| | ||| ||| |||||||| | || | ||| | Sbjct 663502 TC-AGAAGCTCTGGTATGCCATTCTCGAGGCCCAGACTGAGACTGGTAACCCCTTCATGC 663444 Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290 |||| |||||| | || || || ||||| || |||| || || ||| Sbjct 663443 TCTATAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCGCAGCT 663384 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTC 97350 |||| || ||||| || || || |||||| |||| || ||| ||| || ||| | Sbjct 663383 CCAACCTTTGCACCGAGATCGTCGAGTACAGTGCTCCTGATGAGGTGGCTGTCTGCAACC 663324 Query 97351 TGGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381 |||| || || || |||| ||||| || Sbjct 663323 TGGCTTCCCTCGCCCTCCCCACCTTTGTCGA 663293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058347781920