Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001561935.1_202016-02- 16] 92 sequences; 29,140,916 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq2 156 5e-33 seq73 118 1e-21 >seq2 Length=1012446 Score = 156 bits (172), Expect = 5e-33 Identities = 730/1145 (64%), Gaps = 22/1145 (2%) Strand=Plus/Plus Query 62898 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62957 || ||||| || || || || ||||||| || | | || | | ||||| |||||| Sbjct 663317 GAAGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACTGTACTCGACGATCTCGGTGCAA 663376 Query 62958 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63017 || || | ||||| || | || | || |||||||| ||||| || |||||| Sbjct 663377 AGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCC 663436 Query 63018 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63077 ||||| || ||||| || ||||||| ||| |||| | || | ||| || | ||||| | Sbjct 663437 TTATAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCATACCAGA-G 663495 Query 63078 ACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT--TCGTA--TAGTGTATACA 63132 || ||||||| || | || | | ||| | ||||| | ||| | | Sbjct 663496 CTTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCCTGCTCGTACTTCACGTAAAGA 663553 Query 63133 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCA 63192 ||| ||||||| || || |||||| ||| || || || | || || | | Sbjct 663554 G-CGT-CGAACTCATCACCGTAAACATCAGCCAGGCCGGGGGCCTCGTTGGGGCAGAAGA 663611 Query 63193 ACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 63252 | ||| || |||| ||| || || ||||| |||||||| ||| |||| | ||| Sbjct 663612 GGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGAGTCCACAAAGCGT 663671 Query 63253 TAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 63312 || || || | || | | ||||| || || ||||| |||||||||||| Sbjct 663672 AGAAGAGGTCACGGGCGCGAACCTCCTCCTTACCGTGGTTCTTGCGCAGATCGAGGAACT 663731 Query 63313 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTC 63372 | | | ||| | ||||| || |||| ||| || || | | ||||| || ||||| | Sbjct 663732 CGAAGACATCGGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCAGGGCGCTTGTTAC 663791 Query 63373 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGT 63432 | || || || | || | ||||||||||| | || | || ||| |||| |||||||| Sbjct 663792 CACCTTGGTCCACATAGCGTGCGGTGTTATTGAACACGCGCAGCATAGGAACAATACCGT 663851 Query 63433 TTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATAT--TACTAATTGA 63490 | || || ||||| || || || || | || ||||| | ||| | Sbjct 663852 TGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATTCA 663911 Query 63491 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63550 | || || || || || | || ||||| | || || || | || || ||||| Sbjct 663912 AA--CCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGAT 663969 Query 63551 ACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 63610 |||||| ||||| || || ||| || || || || || |||| | ||| | Sbjct 663970 ACCCTCAATGCTGTCCGCGCTCACGTCAACCAGGAAGCA---AGACGCAAGCTGAGGTTG 664026 Query 63611 ---AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAG 63667 ||| | ||||| || | || || || ||||| || || | || | || | | Sbjct 664027 GGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGAACTTCTGGGACATCAA 664086 Query 63668 ATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCAT 63727 | ||| |||||||| || || |||||| |||||||| || || |||||||| Sbjct 664087 GTGGTATGTCTCAATGGCCTTTTCAATATCCTCGCCGTGAATTCCGACAGCAACACGCAT 664146 Query 63728 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63787 | || ||||||||| | ||| | | ||| ||| || | | ||| || || Sbjct 664147 CAGCAAGTGCTGAGGACGCTCAGCAACGTTGCCGTTAATCCGAAGAAGGTATGAACGCTC 664206 Query 63788 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63847 | ||| || || || || ||||||| ||||| || ||||| | ||| ||||||| Sbjct 664207 GAGAGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGAGTT 664266 Query 63848 GAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT-GAAATAATCGGAGAAT 63906 ||| | || || || |||| || || | ||| | ||| || || || |||| | Sbjct 664267 GAGCTCTTCGGCATGCTTCATAACGATCTCG-TAGTGTTCCTTTGAGATCATAGGAGCAG 664325 Query 63907 GTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 63966 | || || || || || ||||||| | | | || || || ||| | | Sbjct 664326 GCTTATTGTTCTTGGGGTTCACATAGTGGTAGAGGTCGGAAATGACCATGGAGAATTGCT 664385 Query 63967 tttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCG 64026 |||| |||| |||||| ||||| || ||||| || | || || ||||||||||| || | Sbjct 664386 TTTTGGTTTGCTTGTGGAGATTCGAAACGGCGATACGTGCAGCCAGAATGGCATAGTCGG 664445 Query 64027 GATGT 64031 | ||| Sbjct 664446 GGTGT 664450 >seq73 Length=6463649 Score = 118 bits (130), Expect = 1e-21 Identities = 113/145 (78%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||| || ||| ||||||||||| | | || || |||||||| || ||||| Sbjct 574140 CAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGA 574199 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||| | ||||||||| || ||||| || ||||| |||||||| || || |||||| Sbjct 574200 CCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAG 574259 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAA 33448 || || || || || || ||||||| Sbjct 574260 ATACCCTCAACAGCGGCGAAGGCAA 574284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946483610720