Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001561935.1_202016-02- 16] 92 sequences; 29,140,916 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq2 141 1e-28 seq73 104 3e-17 >seq2 Length=1012446 Score = 141 bits (156), Expect = 1e-28 Identities = 727/1145 (63%), Gaps = 22/1145 (2%) Strand=Plus/Plus Query 62753 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62812 || ||||| || || || || ||||||| || | | || | | ||||| |||||| Sbjct 663317 GAAGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACTGTACTCGACGATCTCGGTGCAA 663376 Query 62813 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 62872 || || | || || || | || | || |||||||| ||||| || |||||| Sbjct 663377 AGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCC 663436 Query 62873 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 62932 ||||| || ||||| || ||||||| ||| |||| | || | ||| || | ||||| | Sbjct 663437 TTATAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCATACCAGA-G 663495 Query 62933 ACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT--TCGTA--TAGTGTATACA 62987 || ||||||| || | || | | ||| | ||||| | ||| | | Sbjct 663496 CTTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCCTGCTCGTACTTCACGTAAAGA 663553 Query 62988 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCA 63047 ||| ||||||| || || |||||| |||| || || || | || || | | Sbjct 663554 G-CGT-CGAACTCATCACCGTAAACATCAGCCAGGCCGGGGGCCTCGTTGGGGCAGAAGA 663611 Query 63048 ACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 63107 | ||| || |||| ||| || || ||||| |||||||| ||| |||| | ||| Sbjct 663612 GGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGAGTCCACAAAGCGT 663671 Query 63108 TAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 63167 || || || | || | | ||||| || || ||||| |||||||||||| Sbjct 663672 AGAAGAGGTCACGGGCGCGAACCTCCTCCTTACCGTGGTTCTTGCGCAGATCGAGGAACT 663731 Query 63168 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTC 63227 | | | ||| | ||||| || |||| ||| || || | | ||||| || ||||| | Sbjct 663732 CGAAGACATCGGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCAGGGCGCTTGTTAC 663791 Query 63228 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 63287 | || || || | || | ||||||||||| | || | || ||| |||| |||||| | Sbjct 663792 CACCTTGGTCCACATAGCGTGCGGTGTTATTGAACACGCGCAGCATAGGAACAATACCGT 663851 Query 63288 TGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGA 63345 |||| | || ||||| || || || || | || ||||| | ||| Sbjct 663852 TGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATT-- 663909 Query 63346 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 63405 | ||| || || || || | || ||||| | || || || | ||||| ||||| Sbjct 663910 CAAACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGAT 663969 Query 63406 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGGTGACG 63462 ||||| || || || | ||| || || || | ||| |||| | || | | Sbjct 663970 ACCCTCAATGCTGTCCGCGCTCACGTCAACCAGGA---AGCAAGACGCAAGCTGAGGTTG 664026 Query 63463 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAG 63522 ||| | ||||| || | || || || |||||||| || | || | || | | Sbjct 664027 GGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGAACTTCTGGGACATCAA 664086 Query 63523 ATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCAT 63582 | ||| |||||||| || || |||||| |||||||| || || |||||||| Sbjct 664087 GTGGTATGTCTCAATGGCCTTTTCAATATCCTCGCCGTGAATTCCGACAGCAACACGCAT 664146 Query 63583 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63642 | || ||||||||| | ||| | | ||| ||| || | | ||| || || Sbjct 664147 CAGCAAGTGCTGAGGACGCTCAGCAACGTTGCCGTTAATCCGAAGAAGGTATGAACGCTC 664206 Query 63643 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63702 | ||| || || || || ||||||| ||||| || ||||| | ||| ||||||| Sbjct 664207 GAGAGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGAGTT 664266 Query 63703 GAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATAC-TTGAAATAATAGGAAAAT 63761 ||| | || || || |||| | | | | || | | |||| || |||||| | Sbjct 664267 GAGCTCTTCGGCATGCTTCATAACGATCT-CGTAGTGTTCCTTTGAGATCATAGGAGCAG 664325 Query 63762 GTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 63821 | || || || || || ||||||| | | | || || || ||| | | Sbjct 664326 GCTTATTGTTCTTGGGGTTCACATAGTGGTAGAGGTCGGAAATGACCATGGAGAATTGCT 664385 Query 63822 tttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCG 63881 |||| |||| ||||| ||||| || ||||| || | || || ||||||||||| || | Sbjct 664386 TTTTGGTTTGCTTGTGGAGATTCGAAACGGCGATACGTGCAGCCAGAATGGCATAGTCGG 664445 Query 63882 GATGT 63886 | ||| Sbjct 664446 GGTGT 664450 >seq73 Length=6463649 Score = 104 bits (114), Expect = 3e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || ||||| || ||| ||||||||||| | | || | |||||||| || ||||| Sbjct 574140 CAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGA 574199 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 |||||||| | ||||||||| || ||||| || ||||| || ||||| || || ||||| Sbjct 574200 CCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAG 574259 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAA 32805 || || || || || || ||||||| Sbjct 574260 ATACCCTCAACAGCGGCGAAGGCAA 574284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631271323200